Pairwise Alignments

Query, 497 a.a., Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) from Sphingobium sp. HT1-2

Subject, 407 a.a., exodeoxyribonuclease VII large subunit from Methanococcus maripaludis JJ

 Score =  220 bits (560), Expect = 8e-62
 Identities = 124/334 (37%), Positives = 199/334 (59%), Gaps = 11/334 (3%)

Query: 27  LSVSELSGLLKRTVEDRFGHVR--LRGEISGFKRAASGHLYLALKDDNAVLDGVMWKGGA 84
           L+VSEL+  +K T+E+ F   R  ++GEIS      SGH+Y  LKD+N+ +D VM+K   
Sbjct: 14  LTVSELNSYVKSTLEEDFLLKRACIKGEISNCTLHKSGHVYFTLKDENSAIDCVMFKPYT 73

Query: 85  QRLAFQPQDGVEVIATGKLTTYPGRSKYQIVIDRMELAGEGALMALLEKLKAKLAAEGLF 144
           ++L F P +G+ VI  GK++ Y    KYQ   + ME  G G L    +KLK KL +EGLF
Sbjct: 74  KKLDFSPTEGMSVIIKGKVSLYTKTGKYQFYCNEMEKEGLGDLFIKFKKLKEKLESEGLF 133

Query: 145 NRDRKRRLPFLPRTIGVVTSPTGAVIRDILHRLADR-CPTQVLLWPVLVQGQGAAEQIAR 203
           N + K+++P   + IG++TSPTGA IRDI+    +R     ++++P +VQG+ AA+ +  
Sbjct: 134 NEEYKQKIPKYLKNIGIITSPTGAAIRDIIKVTRNRNSSVNIIIYPAVVQGESAAKTV-- 191

Query: 204 AVRGFSAMDGSGPLPRPDLVIVARGGGSIEDLWSFNEEIVVRAVAECSIPTISAVGHETD 263
            + G S ++    L + DL+I+ARGGGS+EDLW FN E +VR + E   P I+ +GHETD
Sbjct: 192 -IAGISELN---KLEKIDLIIIARGGGSMEDLWCFNNESLVRTIFESKKPVITGIGHETD 247

Query: 264 TTLCDYAADMRAPTPTAAAEMAVPVRAELLAMLGEMGLRSGRAVRRGAMQARERLDMQAR 323
            T+ D+ +D+RA TP+ AAE+A+    EL +M+  +       V+         LD+   
Sbjct: 248 FTISDFVSDLRAATPSNAAELAIYNEYELKSMINNLERMLKHKVKTEISNRSYELDILYS 307

Query: 324 LMP--TPDTLLAPQRQRLDLLSDGLNSGLRHRLA 355
            +   +P + +  Q+  +D +   +N  ++++++
Sbjct: 308 KIEKNSPKSKIEKQKVHVDKIRAQMNHEIKNKIS 341