Pairwise Alignments

Query, 981 a.a., TonB-dependent receptor from Sphingobium sp. HT1-2

Subject, 652 a.a., iron-regulated outer membrane virulence protein from Vibrio cholerae E7946 ATCC 55056

 Score = 79.3 bits (194), Expect = 8e-19
 Identities = 71/276 (25%), Positives = 122/276 (44%), Gaps = 28/276 (10%)

Query: 11  RASAAPAILGASL---FATAASAQDAPQTAEAAATDTIVVTGSLIRNPNLTSSSPVTAVG 67
           R + +P  L  +L   F+ +A AQDA +T E     T+VVT +        + + ++ + 
Sbjct: 3   RFNPSPVSLSVTLGLMFSASAFAQDATKTDE-----TMVVTAAGYAQVIQNAPASISVIS 57

Query: 68  ETEMQLRQTTNAEALLRDIPGVVPSIGQNVNNGNGGAAYVNLRGLGRNRNIVLLDGQRVT 127
             +++ R   +    L+ +PGV  +       G G    +++RG+G N  ++L+DG+R T
Sbjct: 58  REDLESRYYRDVTDALKSVPGVTVT-------GGGDTTDISIRGMGSNYTLILVDGKRQT 110

Query: 128 PADFGGSFDLNNI------PTALVSRVDVLTGGASTTYGADAVSGVVNFITRRD----FA 177
                 + D   I      P   + R++V+ G  ST YG+DA+ GV+N ITR+D      
Sbjct: 111 SRQTRPNSDGPGIEQGWLPPLQAIERIEVIRGPMSTLYGSDAIGGVINIITRKDQQQWSG 170

Query: 178 GMDLSIGEQITDQGDGNRFNMDFTVGANFDDGRGNAVLSVGYQ-EADPIYQGDRDISVFG 236
            + LS   Q  ++  G+  + +F V     D     V     Q + D I  G  D S+  
Sbjct: 171 NVQLSTVVQ-ENRASGDEQSANFFVTGPLSDALSLQVYGQTTQRDEDEIEHGYGDKSLRS 229

Query: 237 ISSTTG-RASGSSFTSTPTGISFATEDTQVSPDGQS 271
           ++S    + +         G+S    +  V    QS
Sbjct: 230 LTSKLNYQLNPDHQLQLEAGVSAQDRENNVGKSAQS 265



 Score = 28.9 bits (63), Expect = 0.001
 Identities = 56/221 (25%), Positives = 82/221 (37%), Gaps = 54/221 (24%)

Query: 620 NIGELFAPVVTGLTSLATDPCAGAAPTTNANLRAVCLAQGAPAASIGAIQTPSADQANAT 679
           N G  F+P V G+ +L  DP        +   RA  L +  P            D    +
Sbjct: 391 NYGSHFSPRVYGVWNL--DPLWTVKGGVSTGFRAPQLREVTP------------DWGQVS 436

Query: 680 GGGN----PNIRPETAKTFTVGMVLQPRNFVSGLTVSVDYYNIKVSNAITAATPLDIMGA 735
           GGGN    P+++PET+    + ++       SGL  S+  ++    + IT         A
Sbjct: 437 GGGNIYGNPDLKPETSINKELSLMYSTG---SGLAASLTAFHNDFKDKITRV-------A 486

Query: 736 CFDNI-TAASATSEACTSIRRNPANGRLSGTSTATNPILGLPQPLTNNGRLATDGIDLSV 794
           C  NI TA      A  + R N       G        L LP          T+ ++LS 
Sbjct: 487 CPANICTAGPNQWGAAPTYRVNIDEAETYGAEAT----LSLP---------ITESVELSS 533

Query: 795 NY------QTDLNFAQLAL------SFNGNWTNKSTFRASS 823
           +Y      Q   NFA   L       FN N + ++T R +S
Sbjct: 534 SYTYTHSEQKSGNFAGRPLLQLPKHLFNANLSWQTTDRLNS 574



 Score = 27.3 bits (59), Expect = 0.003
 Identities = 20/104 (19%), Positives = 42/104 (40%), Gaps = 21/104 (20%)

Query: 858 VDLSLLWRYIDSVKYEGQASDYVARGFTTASRNLFNGEITGPS----------------- 900
           V+LS  + Y  S   E ++ ++  R      ++LFN  ++  +                 
Sbjct: 529 VELSSSYTYTHS---EQKSGNFAGRPLLQLPKHLFNANLSWQTTDRLNSWANLNYRGKEM 585

Query: 901 -PLAGKSYNFNKISAYNYFDLTTRFGITDNLDLTMSAFNIFDKK 943
            P  G S +     +Y + D    + +TD   +  + +N+FD++
Sbjct: 586 QPEGGASNDDFIAPSYTFIDTGVTYALTDTATIKAAVYNLFDQE 629