Pairwise Alignments

Query, 349 a.a., Transcriptional regulator, LacI family from Sphingobium sp. HT1-2

Subject, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

 Score =  135 bits (341), Expect = 1e-36
 Identities = 104/345 (30%), Positives = 171/345 (49%), Gaps = 20/345 (5%)

Query: 11  TIREVAARAGVSMMTASRAINGKALVSAKSQQAVEQAVKDLGYVPNASARALVGSADRRV 70
           T+++VA  AGVS  T SRA+     VS+ +++ VE+AV + GY PN+ AR L  +  + +
Sbjct: 3   TMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTI 62

Query: 71  ALLHSNSTTSAYLGELLLGALGEAPQRHLHLVV------EQCAPGAFAKEI-VDQVSKAH 123
             +  +     Y  E++ G + +A   H +LV+      ++    +F   +   Q     
Sbjct: 63  VAIVPD-ICDPYFSEIIRG-IEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGML 120

Query: 124 VAGVILPPPLCDWAELVEALQARDIAVVGIAPDGDVPGMLAVGTDDRHAAYDLTRHLIDL 183
           + G  LP    D ++  +      +     AP+ ++P    V  D+  +A++   +L  L
Sbjct: 121 LLGTDLP---FDVSKPEQKNLPPMVMACEFAPELELP---TVHIDNLTSAFEAVNYLTQL 174

Query: 184 GHRQIGFISGNIRHRASARRLQGFRDCLADRGIRLDERWIVPGDFSYRSGLDAAEQLLSL 243
           GH++I  ISG         R QG++  L   GI ++  +   GDF++ +G  A  QLL+L
Sbjct: 175 GHKRIAQISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLAL 234

Query: 244 DTPPSAIFACNDDMAAAAITVAHQRRINVPGDITICGFDDTPLASAIWPALTTIRQPIRD 303
              P+AIF  ND MA  AI  A +  + VP D+++ GFDD   A    P LTTI QP  +
Sbjct: 235 PEQPTAIFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYE 294

Query: 304 MAREAIGLLGAHFSSQDDGAGEEALGRVKLDYQLIRRQSDAVPSR 348
           + R+A+ ++       D  AG        L+ +L+ R+S A PS+
Sbjct: 295 IGRQAMLMMLELLRGHDVRAGSRL-----LETKLVVRESAAPPSK 334