Pairwise Alignments

Query, 349 a.a., Transcriptional regulator, LacI family from Sphingobium sp. HT1-2

Subject, 340 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  133 bits (335), Expect = 6e-36
 Identities = 96/311 (30%), Positives = 153/311 (49%), Gaps = 7/311 (2%)

Query: 12  IREVAARAGVSMMTASRAINGKALVSAKSQQAVEQAVKDLGYVPNASARALVGSADRRVA 71
           I++VA  AGV+  T SR ING+     ++++ VEQA+  L Y P+A AR+L  S+   + 
Sbjct: 4   IKDVAELAGVNRSTVSRIINGEGKFKEETRRKVEQAMAQLNYRPSAIARSLATSSSNMMG 63

Query: 72  LLHSNSTTSAYLGELLLGALGEAPQRHLHLVVEQCAPGAFA-KEIVDQVSKAHVAGVILP 130
           LL +  T   + GE++     E    H  L+  Q    A   +E + +       G +L 
Sbjct: 64  LLVTYYT-GGFFGEMMEQVQTELDMHHKFLITAQGHHSAQGEREAIQRFHDLRCDGYVLH 122

Query: 131 PPLCDWAELVEALQARDIAVVGIAPDGDVPGM--LAVGTDDRHAAYDLTRHLIDLGHRQI 188
                  +L  AL  +    V +  D  V G+    +  D R A+  +  +LI  GHR+I
Sbjct: 123 SRYLSDDDL-RALAQQPTPFVLL--DRYVAGLEERCITFDHRGASQIVVEYLIQQGHRKI 179

Query: 189 GFISGNIRHRASARRLQGFRDCLADRGIRLDERWIVPGDFSYRSGLDAAEQLLSLDTPPS 248
             I+G +    S  R QG+ D LA  GI   +     G++  +SG  A +QL +     +
Sbjct: 180 ACITGPLHRHNSRLRQQGYLDALAQAGILPSKSLCEEGNYGRKSGYFAMQQLFARHPEIT 239

Query: 249 AIFACNDDMAAAAITVAHQRRINVPGDITICGFDDTPLASAIWPALTTIRQPIRDMAREA 308
           A+F+C+++M   A+   H++ I VPG I+I  FD   L  +++P +T +  PI +MAR A
Sbjct: 240 AVFSCSEEMTTGALQYLHEQGIAVPGRISIVSFDSVDLCESLYPTVTAVHFPISEMARAA 299

Query: 309 IGLLGAHFSSQ 319
           +  L A    Q
Sbjct: 300 VQSLIAMVKQQ 310