Pairwise Alignments

Query, 397 a.a., Pyridoxal 5-phosphate (PLP)-dependent ornithine decarboxylase (EC 4.1.1.17) from Sphingobium sp. HT1-2

Subject, 417 a.a., diaminopimelate decarboxylase from Vibrio cholerae E7946 ATCC 55056

 Score = 81.3 bits (199), Expect = 5e-20
 Identities = 85/342 (24%), Positives = 154/342 (45%), Gaps = 30/342 (8%)

Query: 39  FPGRSLYAVKANPSPDLIRTLFDSGITHFDVASIAEVRLVAETLEGKAKLCFMHPVKAEE 98
           +P    YAVKAN +  ++ TL   G + FD+ S+ E+  V       +K+ F    K E 
Sbjct: 52  YPHLICYAVKANSNLGVLNTLARLG-SGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEA 110

Query: 99  AIAEAYHVHGVRTFSLDTIDELEKIMRATGDATDLELCARLRVSSE-----HSELSLA-- 151
            +  A  +  ++ F++++  EL+++ +  G+   ++    LR++ +     H  +S    
Sbjct: 111 EMKRALQLK-IKCFNVESEPELQRLNKVAGEL-GVKAPISLRINPDVDAKTHPYISTGLR 168

Query: 152 -SKFGAELGETREL--LMATRQAADALGICFHVGSQAMSPQAYSDAIERVRAAIVDA--- 205
            +KFG       ++  L  +    D  GI  H+GSQ  +   + DA +R+  A++D+   
Sbjct: 169 DNKFGITFDRAAQVYRLAHSLPNLDVHGIDCHIGSQLTALAPFIDATDRL-LALIDSLKA 227

Query: 206 -AVTVDIIDVGGGFPSIYPGMEPVALENYFEAIHRGFESLPVSYSSELWCEPGRALSAEY 264
             + +  +DVGGG   +Y    P     Y +A+    + L      EL  EPGRA++A  
Sbjct: 228 EGIHIRHLDVGGGLGVVYRDELPPQPSEYAKAL---LDRLERHRDLELIFEPGRAIAANA 284

Query: 265 SSIIVRVERRRGQE---LYINDGAYGALF-DAAHIGWRFPVALLREDESEEELEGFSFYG 320
             ++ +VE  +  E     I D A   L   A +  W+  + L      + E + +   G
Sbjct: 285 GVLVTKVEFLKHTEHKNFAIIDAAMNDLIRPALYQAWQDIIPL---RPRQGEAQTYDLVG 341

Query: 321 PTCDDMDHMVGPFMVPADVKVGDYIEIGMLGAYGAAMRTGFN 362
           P C+  D +     +   ++ GD + +   GAYG  M + +N
Sbjct: 342 PVCETSDFLGKDRDLV--LQEGDLLAVRSSGAYGFTMSSNYN 381