Pairwise Alignments

Query, 397 a.a., Pyridoxal 5-phosphate (PLP)-dependent ornithine decarboxylase (EC 4.1.1.17) from Sphingobium sp. HT1-2

Subject, 391 a.a., ornithine decarboxylase (RefSeq) from Shewanella amazonensis SB2B

 Score =  108 bits (269), Expect = 3e-28
 Identities = 105/365 (28%), Positives = 168/365 (46%), Gaps = 27/365 (7%)

Query: 17  AAPVTLIRPEAAARAARFFTEKFPGRSLY-AVKANPSPDLIRTLFDSGITHFDVASIAEV 75
           A P  +I     A+        FP  ++Y AVKANP+ +++  L D G ++FD+ASI E+
Sbjct: 29  ATPFVVIDTNIIAKQYDDMVTNFPFANVYYAVKANPAKEILTLLKDKG-SNFDIASIYEL 87

Query: 76  RLVAETLEGKAKLCFMHPVKAEEAIAEAYHVHGVRTFSLDTIDELEKIMR-ATGDATDLE 134
            +V        ++ F + +K  + +  A++  GVR F+ D+  +L  I   A G    + 
Sbjct: 88  DMVMAVGVTADRVSFGNTIKKRKDV-RAFYERGVRLFASDSEADLRMIAEEAPGSKVYVR 146

Query: 135 LCARLRVSSEHSELSLASKFGAELGETRELL-MATRQAADALGICFHVGSQAMSPQAYSD 193
           +   L   S+ ++  L+ KFG +     ELL +A     D  GI FHVGSQ     A+  
Sbjct: 147 I---LTEGSQTADWPLSRKFGCQNEMAYELLALAKELGLDPYGISFHVGSQQRDIGAWDA 203

Query: 194 AIERVRAAI----VDAAVTVDIIDVGGGFPSIYPGMEPVALENYFEAIHRGFESLPVSYS 249
           AI +V+        D  + + +I++GGGFP+ Y   +   L  Y + I    +       
Sbjct: 204 AIGKVKVLFDRLREDHGIVLKMINMGGGFPANYID-KTNQLGVYAQQIKHFLKEDFGDEL 262

Query: 250 SELWCEPGRALSAEYS---SIIVRVERRRGQEL----YINDGAYGALFDAAHIGWRFPVA 302
            E+  EPGR+L +      S +V + R+    L    Y + G +  L +      ++P+ 
Sbjct: 263 PEIILEPGRSLISNAGVLISEVVLISRKSHTALERWVYTDVGKFSGLIETMDEAIKYPIF 322

Query: 303 LLREDESEEELEGFSFYGPTCDDMDHMVGPFM--VPADVKVGDYIEIGMLGAYGAA-MRT 359
                E + EL+     GPTCD  D M   +   +PAD+ +GD +     GAY       
Sbjct: 323 ----TEKKGELDKCVIAGPTCDSADIMYEHYAYGLPADLAIGDRLYWLTAGAYTTTYSAV 378

Query: 360 GFNGF 364
            FNGF
Sbjct: 379 CFNGF 383