Pairwise Alignments

Query, 422 a.a., NADH dehydrogenase transmembrane protein from Sinorhizobium meliloti 1021

Subject, 434 a.a., respiratory NADH dehydrogenase 2/cupric reductase (NCBI) from Escherichia coli BW25113

 Score =  155 bits (392), Expect = 2e-42
 Identities = 121/395 (30%), Positives = 184/395 (46%), Gaps = 29/395 (7%)

Query: 7   VVVVGGGFGGLQLVNDL-----KGAPVKVTLIDRRNHHLFQPLLYQVATTVLATSEIAWP 61
           +V+VGGG GGL++   L     +    K+TL+DR + HL++PLL++VAT  L     A  
Sbjct: 8   IVIVGGGAGGLEMATQLGHKLGRKKKAKITLVDRNHSHLWKPLLHEVATGSLDEGVDALS 67

Query: 62  IRRLYRDRQEVTTLLGEVAGVDMIAKEVTLAH-----------GQSIPYDTLVLATGATH 110
                R+       LG V  +D  AK +T+A             + I YDTLV+A G+T 
Sbjct: 68  YLAHARNHG-FQFQLGSVIDIDREAKTITIAELRDEKGELLVPERKIAYDTLVMALGSTS 126

Query: 111 AYFGHDEWAAVAPGLKTLEDATTIRRRVLIAFEQAEVEEDTARRDALLTFTIIGAGPTGV 170
             F           L     A    + +L  F +          +  +   I+G G TGV
Sbjct: 127 NDFNTPGVKENCIFLDNPHQARRFHQEMLNLFLKYSANLGA---NGKVNIAIVGGGATGV 183

Query: 171 ELAGIIAEMAHRTLPGEFRRIDTRLARVVLVEAGPRILPAFSEELSAYASRELEKLGVEV 230
           EL+  +     +     ++ +      V LVEAG RILPA    +SA A  EL KLGV V
Sbjct: 184 ELSAELHNAVKQLHSYGYKGLTNEALNVTLVEAGERILPALPPRISAAAHNELTKLGVRV 243

Query: 231 LTGTPVTDCTDEGV-TIGESFVPSRTLVWAAGVQASPAARWVGA-DADRAGRVKVGPDLT 288
           LT T VT   + G+ T    ++ +  +VWAAG++A    + +G  + +R  ++ V P L 
Sbjct: 244 LTQTMVTSADEGGLHTKDGEYIEADLMVWAAGIKAPDFLKDIGGLETNRINQLVVEPTLQ 303

Query: 289 APHHPDIFVIGDTASVIQEDGKPVPGIAPAAKQQGAYVAQVIRGRLTGSPAPGPFRYRHQ 348
               PDI+ IGD AS  + +G  VP  A AA Q        I  ++ G P    ++Y+  
Sbjct: 304 TTRDPDIYAIGDCASCPRPEGGFVPPRAQAAHQMATCAMNNILAQMNGKPLKN-YQYKDH 362

Query: 349 GSL------ATIGKRAAIIDFGRIKLRGSLAWWIW 377
           GSL      +T+G     +  G + + G +A +++
Sbjct: 363 GSLVSLSNFSTVGSLMGNLTRGSMMIEGRIARFVY 397