Pairwise Alignments

Query, 178 a.a., RNA polymerase sigma-E factor (sigma-24) protein from Sinorhizobium meliloti 1021

Subject, 183 a.a., sigma-70 family RNA polymerase sigma factor from Dickeya dadantii 3937

 Score = 86.3 bits (212), Expect = 3e-22
 Identities = 61/171 (35%), Positives = 88/171 (51%), Gaps = 10/171 (5%)

Query: 4   IMRSRVERRLEPHYARLFAYAVALSRDRDGAQDIFQECIARALDARSVPETEPAFRAWLF 63
           I  S V ++L  H  RL+ Y + LSR  D A+++ Q    RAL+  +          WLF
Sbjct: 13  ITTSEVRQQLAAHLTRLWRYGLVLSRSHDAAEELVQSTCVRALEKSAQFTPGTRIDRWLF 72

Query: 64  AILRNIWIDQSRLRRRRSDLEQEFVTDLVPAPVAPETVLVDAF-----SVRQAFTRLSTE 118
           +IL +IWI  S LR RR  + Q FV       +AP+T  ++        + Q    L   
Sbjct: 73  SILHSIWI--SDLRARRVRMGQGFVES--DELLAPDTHALNDDRRHYQKIMQRVNALPEA 128

Query: 119 HREILALVDISGFSYEEVAMMIAVPKGTVMSRVSRARRALASYLGDANVVE 169
            R  + LV + GF+Y+E A  ++VP GT+MSR++ AR  LA  + DA V E
Sbjct: 129 QRNAIFLVYVEGFTYQEAADTLSVPIGTIMSRLAAARTILAQSV-DAPVSE 178