Pairwise Alignments

Query, 178 a.a., RNA polymerase sigma-E factor (sigma-24) protein from Sinorhizobium meliloti 1021

Subject, 157 a.a., RNA polymerase sigma factor from Brevundimonas sp. GW460-12-10-14-LB2

 Score = 78.6 bits (192), Expect = 5e-20
 Identities = 53/147 (36%), Positives = 73/147 (49%), Gaps = 3/147 (2%)

Query: 19  RLFAYAVALSRDRDGAQDIFQECIARALDARSVPETEPAFRAWLFAILRNIWIDQSRLRR 78
           RL  +A  L      AQD+ Q+ + RAL +R          +W F I+R I ID  R  +
Sbjct: 4   RLRRFARVLRPQDADAQDLVQQTVERALASRKGFRAGTRLDSWAFTIMRRIAIDDGRKAQ 63

Query: 79  RRSDL--EQEFVTDLVPAPV-APETVLVDAFSVRQAFTRLSTEHREILALVDISGFSYEE 135
           R S +   ++  T   P P  A E +  DA   R A   L  + R+ +ALV I G SY E
Sbjct: 64  RWSRVVSPEDDATPRAPDPAQAGEGLRTDALEARDAIDALPEDQRQAVALVLIEGLSYAE 123

Query: 136 VAMMIAVPKGTVMSRVSRARRALASYL 162
            A ++ VP GT+ SR+ R R+AL   L
Sbjct: 124 AAQVLGVPAGTLTSRLVRGRQALVEIL 150