Pairwise Alignments

Query, 337 a.a., periplasmic binding ABC transporter protein from Sinorhizobium meliloti 1021

Subject, 312 a.a., substrate-binding domain-containing protein from Pectobacterium carotovorum WPP14

 Score = 68.6 bits (166), Expect = 2e-16
 Identities = 85/301 (28%), Positives = 131/301 (43%), Gaps = 32/301 (10%)

Query: 11  LSVACLAAGLTAPQANAADREFALVFKVLNNA--FSPPIQQGCEAAAKKLGDVTCTYLGP 68
           +SV+ +A  L       A  E  +VF   N A  F   +Q+    AAK+LG       G 
Sbjct: 5   ISVSAIAIALGLSGFAQAQNE-QIVFSTPNLAMPFEVHMQRTAVKAAKELGVNLQVLDG- 62

Query: 69  TEYDEAKQVQLAQDMVTRGVAGLGVSAGNPKAMARIMKMAQDKGIPVVTFDTDVLPEDAG 128
            +    KQ    ++ +TRG  G  VS  +  A++  +   QD  +PVVT D  V  E A 
Sbjct: 63  -QGSSPKQAADLENAITRGAQGFVVSPNDVNAVSSAVTDIQDAKLPVVTLDRSVKTEKA- 120

Query: 129 LRSTYIGTDNYEFGIALAQKVLESKKDGGTVCIQSGAPASENLKARVQGIRDTL-AGVTK 187
               + G +NY+ G A+A  V     DG  + + +G P S +   R QGIRD+L AG +K
Sbjct: 121 --VPHFGANNYKGGQAIADYVKTKFPDGAEIILLTGQPGSSSNIERTQGIRDSLKAGGSK 178

Query: 188 DKGAEKLTGQNGWTEPAGCPVYNNDDITLAAQQVRDVMTNNPELSAFVAVGGWAQYAPQA 247
                  TG   W    G  +  +   +L  ++ + +++ N ++    A+G         
Sbjct: 179 YHIVADQTG--NWMRSEGMRIVESVFPSL-PKRPQVILSANDDM----ALG--------- 222

Query: 248 YKQAMEPLKAR-LDSKDLVVVFGDNFGPQLPLLAEGLSHYNIGQRPYDMGYETIMALDKL 306
              A+E L+ + L   D++V   D     L  + +G       QRP   GY    AL +L
Sbjct: 223 ---AIEALQGQGLKPGDVMVTGFDAVPEALARVRDGWLAVTADQRP---GYAVTTALTQL 276

Query: 307 T 307
           T
Sbjct: 277 T 277