Pairwise Alignments

Query, 337 a.a., periplasmic binding ABC transporter protein from Sinorhizobium meliloti 1021

Subject, 311 a.a., D-allose ABC transporter periplasmic binding protein from Escherichia coli BL21

 Score = 64.7 bits (156), Expect = 3e-15
 Identities = 76/305 (24%), Positives = 122/305 (40%), Gaps = 27/305 (8%)

Query: 19  GLTAPQANAADREFALVFKVLNNAFSPPIQQGCEAAAKKLGDVTCTYLGPTEYDEAKQVQ 78
           GL    +  A  E+A+V K L+N F   +++G E  AK LG     +  P+E D   Q+Q
Sbjct: 14  GLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQ 73

Query: 79  LAQDMVTRGVAGLGVSAGNPKAMARIMKMAQDKGIPVVT----FDTDVLPEDAGLRSTYI 134
           L +D+  +   G+  +  +   +   +  A  KGI +V      D D L +  G    ++
Sbjct: 74  LFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFV 133

Query: 135 GTDNYEFGIALAQKVLES-KKDGGTVCIQSGAPASENLKARVQGIRDTLAGVTKDKGAEK 193
            TDN   G   A  +++    +GG V I  G   + + +AR  G  +      K     K
Sbjct: 134 TTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAF----KKASQIK 189

Query: 194 LTGQNGWTEPAGCPVYNNDDITLAAQQVRDVMTNNPELSA-FVAVGGWAQYAPQAYKQAM 252
           L      ++PA      + D   A     +V+  NP + A + A    A    QA   A 
Sbjct: 190 LVA----SQPA------DWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAG 239

Query: 253 EPLKARLDSKDLVVVFGDNFGPQLPLLAEGLSHYNIGQRPYDMGYETIMALDKLTKGEKV 312
           +  K       ++VV  D       ++  G     + Q P D+G   +  +    K  KV
Sbjct: 240 KTGK-------VLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKV 292

Query: 313 EPFIK 317
            P  K
Sbjct: 293 IPLDK 297