Pairwise Alignments

Query, 537 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 470 a.a., DNA repair nucleotidyltransferase from Pseudomonas simiae WCS417

 Score =  108 bits (270), Expect = 4e-28
 Identities = 131/518 (25%), Positives = 194/518 (37%), Gaps = 59/518 (11%)

Query: 23  RILSIHFPHLPTDRVARSRWGASWLSRGRPDHPPVVFAAKIDNAMRLVALDTFAERIGLK 82
           R + I FP L  D V R+           P+ P V+ A      + L  ++  A  +GL+
Sbjct: 2   RWVCIVFPQLALDGVQRAH--------PEPEQPLVLLAGTPQRRV-LQTVNDAARALGLR 52

Query: 83  RGQGAAEARAMCPSLDVIAADPAADQAFLEALADWCDRYTPLVALDGTDGLFLDITGCAH 142
            GQ    A A+  +      DPA  + + + LA W  +++  V+L     L  +I     
Sbjct: 53  PGQSLTAAHALAKTFASAEYDPAEIERYQQFLAAWAYQFSSQVSLYYPRALLFEIESSLG 112

Query: 143 LHGGEKALISDVLSRLFSLGVEARATVSSAAGLSWAVTRYGDADVIAPGDGDPVLAPLPV 202
           L G      + +   L  LG   R   +     +  +    D   +        LAPLP+
Sbjct: 113 LFGPWPRFEARLRRELTELGFRHRIVAAPNPAAARVLANIYDGLAVQDDGLMQALAPLPI 172

Query: 203 AALRLPADTAAALERVGLKQIGDLLEAPRAPLARRFGSSLLLRLDQARGFEDEPLSPRLP 262
               L    A AL R+GL+ +  +   PR  LARRF + LL  LD   G     L+   P
Sbjct: 173 DRAGLDPQAATALSRMGLRTLAQVQALPRHTLARRFDAGLLKHLDALVGHRPLGLAFYQP 232

Query: 263 VPSFSAERRLAEPLQDEEHILELTRHLARDVRSSLERHGEGGRLFELLLFRVDGRVFRVR 322
              F     L   +Q  + +L   R L  D+ + L     G + F+L L           
Sbjct: 233 PDRFDVRIELNFDVQSHQALLFPLRRLTGDLSAFLCGRDSGVQRFDLHL----------- 281

Query: 323 AHAAVPLNDAVRIAALFRERLQAVHDDLDAGYGFEIVRLSVLRSERL--------DPAQQ 374
            HA  P +  +++  L  ER  A+  +L  G   ++   S +R  RL         P +Q
Sbjct: 282 EHAQAP-DSVIKVGLLSAEREPAMLFELARGRLEQVQVTSPVRGFRLVAQDLPVFVPQRQ 340

Query: 375 D-FSGAPDESQPLAAFVDKVSARFGPGCLMQATLAESHLPERAGGFAAVTDVAAVLRTAA 433
           D F   P ++ P     +++ AR G   +        H PE A   AA   +   L    
Sbjct: 341 DLFDDRPQQTLPWEQLRERLRARLGDEAVQGLRFHADHRPECAWQAAADKTLCPTLNNV- 399

Query: 434 LEEKAFPENRPLRIFAHPEPVEATAEVPEGAPRSFNWRKTRYRVARAEGPERIAAEWWID 493
                    RP  +   P     T    +G             V    GPERI + WW D
Sbjct: 400 --------QRPGWLLNEP-----TLLGEQG-------------VQILMGPERIESGWW-D 432

Query: 494 GEDHPTRDYFRIEDQEGRRFWLFREGLYGRETASPRWF 531
           G D   RDY+ I  + G++ W FR    G       WF
Sbjct: 433 GAD-IRRDYYLILTRAGQQGWAFRTVGQGDGLWLQGWF 469