Pairwise Alignments

Query, 537 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 468 a.a., DNA polymerase IV-like protein ImuB from Pseudomonas sp. S08-1

 Score =  107 bits (267), Expect = 1e-27
 Identities = 135/524 (25%), Positives = 197/524 (37%), Gaps = 74/524 (14%)

Query: 27  IHFPHLPTDRVARSRWGASWLSRGRPDHP--PVVFAAKIDNAMRLVALDTFAERIGLKRG 84
           I  P L  D   R R           D P  P+   +   N   L AL+  A  +GL+ G
Sbjct: 6   ILLPQLALDHALRQR-----------DDPQAPLALLSGPANRRVLQALNPAARELGLRPG 54

Query: 85  QGAAEARAMCPSLDVIAADPAADQAFLEALADWCDRYTPLVALDGTDGLFLDITGCAHLH 144
                A+ +         D AA +   + LA W  R++  V+L     L L++     L 
Sbjct: 55  MALNAAQLLSRDFATADYDLAAVERCQQFLAAWAYRFSSQVSLHYPRALLLEVHSSLALL 114

Query: 145 GGEKALISDVLSRLFSLGVEARATVSSAAGLSWAVTRYGDADVIAPGDGDPVLAPLPVAA 204
           G    L   + + L +LG   R  ++     + A+        +        +A LPV  
Sbjct: 115 GPWPRLEQRLRTELDALGYRHRIVLAPNPAAARALANAHAELAVNERQLPRAIAQLPVNR 174

Query: 205 LRLPADTAAALERVGLKQIGDLLEAPRAPLARRFGSSLLLRLDQARGFEDEPLSPRLPVP 264
             LP + A AL R+GL+Q+  +LE PR  LARRF S LL  LDQ  G     L   LP  
Sbjct: 175 AGLPGEMAGALARMGLRQLRQVLELPREGLARRFPSQLLEHLDQLLGHRPLGLDFYLPPD 234

Query: 265 SFSAERRLAEPLQDEEHILELTRHLARDVRSSLERHGEGGRLFELLLFRVDGRVFRVRAH 324
            FS    L   +   + +L   R    D+ + L     G + F L L    G    ++  
Sbjct: 235 EFSTRIELNFEVASHQALLFPLRRAMGDLAAYLASRDGGVQRFSLALEHRSGVATELKVG 294

Query: 325 AAVPLNDAVRIAALFRERLQAVHDDLDAGYGFEIVRLSVLRSERLDPA-----QQDFSGA 379
                 DA  +  L R RL+ +              L++  + R  PA     ++ F   
Sbjct: 295 LLAAERDAGLLFELTRVRLEQLQLPAPV--------LALALTARDLPAFVPECRELFDPR 346

Query: 380 PDESQPLAAFVDKVSARFGPGCLMQATLAESHLPERA-----GGFAAVTDVAAVLRTAAL 434
           P + Q      +++ AR G   L          PE+A     G   A+ D          
Sbjct: 347 PQQKQSWEQLRERLRARLGDDALHGLNAHADPRPEQAWRPFPGKAMALAD---------- 396

Query: 435 EEKAFPENRPLRIFAHPEPVEATAEVPEGAPRSFNWRKTRYRVARA-EGPERIAAEWWID 493
                   RP  +   P+P+                   R  +AR   GPERI + WW D
Sbjct: 397 ------RPRPGWLLHEPQPL-------------------REPLARILAGPERIESGWW-D 430

Query: 494 GEDHPTRDYFRIEDQEGRRFWLFREGLYGRETASPRWFMHGVFA 537
           G D   RDY+ +E + G+R W+FR        A   + +HG FA
Sbjct: 431 GGDL-RRDYYLVETRSGQRAWVFRS-----VGADEPFQLHGWFA 468