Pairwise Alignments

Query, 537 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 470 a.a., DNA polymerase Y family protein from Pseudomonas fluorescens SBW25

 Score =  108 bits (269), Expect = 6e-28
 Identities = 128/504 (25%), Positives = 189/504 (37%), Gaps = 59/504 (11%)

Query: 23  RILSIHFPHLPTDRVARSRWGASWLSRGRPDHPPVVFAAKIDNAMRLVALDTFAERIGLK 82
           R + I FP L  D V R            PD P  + A      + L  ++  A  +GL+
Sbjct: 2   RWVCIVFPQLALDGVQRVH--------PEPDQPLALLAGTPQRRV-LQTVNDAARALGLR 52

Query: 83  RGQGAAEARAMCPSLDVIAADPAADQAFLEALADWCDRYTPLVALDGTDGLFLDITGCAH 142
            GQ    A+A+  +      DPA  +   + LA W  +++  V+L     L  +I     
Sbjct: 53  PGQSLTAAQALTKTFASAEYDPAEIERHQQFLAAWAYQFSSQVSLYYPRALLFEIESSLG 112

Query: 143 LHGGEKALISDVLSRLFSLGVEARATVSSAAGLSWAVTRYGDADVIAPGDGDPVLAPLPV 202
           L G      + +   L  LG   R   +     + A+    D   +        L PLP+
Sbjct: 113 LFGPWPQFEARLRKELAELGFRHRIVAAPNPAAARALANIEDGLAVQDDGLMQALGPLPI 172

Query: 203 AALRLPADTAAALERVGLKQIGDLLEAPRAPLARRFGSSLLLRLDQARGFEDEPLSPRLP 262
               L    A AL R+GL+ +  +   PR  LARRF +SLL  LD   G     L+   P
Sbjct: 173 DRAGLDPQAATALSRMGLRTLAQVQALPRHTLARRFDASLLKHLDALSGQRPLALAFYQP 232

Query: 263 VPSFSAERRLAEPLQDEEHILELTRHLARDVRSSLERHGEGGRLFELLLFRVDGRVFRVR 322
              F     L   +Q  + +L   R L  D+ + L     G + F+L L           
Sbjct: 233 PDRFDVRIELNFDVQSHQALLFPLRRLTGDLSAFLCGRDSGVQRFDLHL----------- 281

Query: 323 AHAAVPLNDAVRIAALFRERLQAVHDDLDAGYGFEIVRLSVLRSERL--------DPAQQ 374
              A   +  +++  L  ER  A+  +L  G    +   S +R  RL         P +Q
Sbjct: 282 -EHAQATDTVIKVGLLSAEREPAMLFELARGRLEHVQVTSPVRGVRLVAQDLPVFVPQRQ 340

Query: 375 D-FSGAPDESQPLAAFVDKVSARFGPGCLMQATLAESHLPERAGGFAAVTDVAAVLRTAA 433
           D F   P ++ P A   +++ AR G   +        H PE A  + A TD         
Sbjct: 341 DLFDDRPQQTLPWAQLRERLRARLGDEAVQGLRFHADHRPECA--WQAATD--------- 389

Query: 434 LEEKAFPENRPLRIFAHPEPVEATAEVPEGAPRSFNWRKTRYRVARAEGPERIAAEWWID 493
                           HP P       P G   S       + V    GPERI + WW D
Sbjct: 390 ---------------KHPCPPLNNVHRP-GWLLSTPTLLAEHGVHILMGPERIESGWW-D 432

Query: 494 GEDHPTRDYFRIEDQEGRRFWLFR 517
           G D   RDY+ I+ + G++ W +R
Sbjct: 433 GAD-VRRDYYLIQTRAGQQGWAYR 455