Pairwise Alignments

Query, 537 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 351 a.a., DNA polymerase IV from Escherichia coli ECRC100

 Score = 63.5 bits (153), Expect = 1e-14
 Identities = 79/315 (25%), Positives = 131/315 (41%), Gaps = 34/315 (10%)

Query: 76  AERIGLKRGQGAAEARAMCPSLDVIAADPAADQAFLEA---LADWCDRYTPLVALDGTDG 132
           A + G++       A  +CP L ++   P    A+ EA   + +   RYT  +     D 
Sbjct: 48  ARKFGVRSAMPTGMALKLCPHLTLL---PGRFDAYKEASNHIREIFSRYTSRIEPLSLDE 104

Query: 133 LFLDITGCAHLHGGEKALISDVLSRLFS-LGVEARATVSSA---AGLSWAVTRYGDADVI 188
            +LD+T   H HG    +  ++   +FS L + A A V+     A ++  + +     VI
Sbjct: 105 AYLDVTDSVHCHGSATLIAQEIRQTIFSELQLTASAGVAPVKFLAKIASDMNKPNGQFVI 164

Query: 189 APGDGDPVLAPLPVAALR-LPADTAAALERVGLKQIGDLLEAPRAPLARRFGSSLLLRLD 247
            P +    L  LP+A +  +   +AA LE +GL+  GD+ +     L +RFG    +  +
Sbjct: 165 TPAEVSAFLQTLPLAKIPGVGKVSAAKLEAMGLRTCGDVQKCDLVILLKRFGKFGRILWE 224

Query: 248 QARGFEDEPLSPRLPVPSFSAERRLAEPLQD--------EEHILELTRHLARDVRSSLER 299
           +++G ++  ++      S   ER +AE +          E    EL R LA+ V+  L  
Sbjct: 225 RSQGIDERDVNSERLRKSVGVERTMAEDIHHWSECEAIIERLYPELERRLAK-VKPDLLI 283

Query: 300 HGEGGRLFELLLFRVDGRVFRVRAHAAVPLNDAVRIAALFRERLQAVHDDLDAGYGFEIV 359
             +G +L      + D      + H    LN A  IA       +   D+   G G   V
Sbjct: 284 ARQGVKL------KFDDFQQTTQEHVWPRLNKADLIAT-----ARKTWDERRGGRG---V 329

Query: 360 RLSVLRSERLDPAQQ 374
           RL  L    LDP  +
Sbjct: 330 RLVGLHVTLLDPQME 344