Pairwise Alignments

Query, 1116 a.a., DNA polymerase III subunit alpha from Sinorhizobium meliloti 1021

Subject, 1021 a.a., error-prone DNA polymerase from Rhodanobacter sp000427505 FW510-R12

 Score =  775 bits (2002), Expect = 0.0
 Identities = 445/1040 (42%), Positives = 610/1040 (58%), Gaps = 40/1040 (3%)

Query: 6    VFCELGARTNFSFLEGAAPAEEMVVFAKKAGLAGLGIADRNSVAGVVRAHAKAKVEGYPF 65
            ++ EL   +N SFL G A A  +   A   G A L I D  S+AG+VR    ++  G P 
Sbjct: 1    MYAELHCLSNLSFLRGVASARALFERAAALGYAALAITDECSLAGIVRGLEASRATGVPL 60

Query: 66   QPGARLVFADGTPDILAYPKNRRGWGHLCRLLSAGNLRSKKGDCTLHLADLLEWQEELLL 125
              G  LV  DG   +L   ++R G+  L RL++    R+ KG       DL    + LL 
Sbjct: 61   IVGTELVLEDGARLVLL-AEDRAGYATLSRLITVARARAAKGAYQARWKDLEGDHQGLLA 119

Query: 126  IVMQGEGRPE-PESLEVLLGTLKEHAGNRLYLGLAPHYDGFDRHDFAVLAAIARKAGIGL 184
            I+   +     P   E     L      R ++G+  H    D       AA+   AG+ L
Sbjct: 120  ILCTIDRHGTVPADAEGRAKRLATVLPQRAWIGVELHRGDRDAEAIIACAAVGAAAGLPL 179

Query: 185  LATNDALYHDPHYRPLADVVTSIREHVPIAGAGFLLQKNAERHLKGPREMARLFSDYPEA 244
            +A  D        R L D VT+IR  +P+A A   L  N ERHL+ P E+  L++  PE 
Sbjct: 180  VAAGDVHMATRGQRALQDTVTAIRLGMPVAAAAGELFPNGERHLRTPAELQELYA--PEL 237

Query: 245  IANTRKFFRELAFSLDELSHQYP-DENADGETPAESLRRLVAEGAAERYPEGVPEKVMRQ 303
            +A T +        L  L +++P D     + PA  LR LV EGAA R+P G P  +  Q
Sbjct: 238  LAETLRIAAHCHLDLGTLGYRHPVDVVPLAQAPATWLRHLVEEGAATRWPAGTPPALGAQ 297

Query: 304  IDYELELIHDKKYEPYFLTVHKLVKFARSVNILCQGRGSAANSSVCFCLGITDVDPQKFT 363
            I+ EL LI +  YE +FLTVH +V++ARS  ILCQGRGSAANS VC+ LGIT+VDP++  
Sbjct: 298  IERELALITELGYEAFFLTVHDIVRYARSRGILCQGRGSAANSVVCYALGITEVDPERGH 357

Query: 364  LLFDRFLSKDRDEPPDIDVDFEHERREEVIQYIYRTYGKEHAGLTAAVISYRSRSAGREV 423
            LLF+RFLS++R EPPDIDVDFEHERREEVIQYIY  YG++ A L AA+ +YR RSA R+V
Sbjct: 358  LLFERFLSRERAEPPDIDVDFEHERREEVIQYIYGRYGRDRAALAAAITTYRPRSAVRDV 417

Query: 424  AKAFGLSEDVQSALVSSIWGWGTSPFTEEQAKGAGLDAADPLTRRVLAYASLLMNFPRHL 483
             +A  L   +   +   +  WG       +   +G+D   P  +R L  A+ L+  PRHL
Sbjct: 418  GRALDLDPVLVDRVAQLLGHWGGMEDVTARLAESGIDTDTPSMQRWLTLAAQLVGTPRHL 477

Query: 484  SQHVGGFVITRDRLDEVVPIMNTAMPDRYMIEWDKDDLDELKILKVDVLALGMLTCLAKG 543
            SQHVGGFVI+   L E+VP+    MP R +I+WDK DL+ + +LKVD+LALGML+ L + 
Sbjct: 478  SQHVGGFVISAAPLTELVPVEPATMPGRTVIQWDKSDLETMGLLKVDILALGMLSVLRRA 537

Query: 544  FKLLEAHYGEPITLAEIYQDHRDAVYDMICRADTVGVFQIESRAQMSMLPRLQPREMYDL 603
            F+ +E H+G  +++A I  +   A Y M+ RADTVGVFQ+ESRAQM+MLPRL+P   YDL
Sbjct: 538  FEHVERHHGTTLSIATIPAED-PATYAMLRRADTVGVFQVESRAQMAMLPRLRPTCFYDL 596

Query: 604  VIEVAIVRPGPIQGNMVHPYLKRREAQRRGEAVVYPSPELKAVLERTLGVPLFQEQAMQI 663
            V++ AI+RPGPIQG MVHPYL+RR+ +   E   YPS E++ VLERTLGVP+FQEQ MQ+
Sbjct: 597  VVQTAIIRPGPIQGGMVHPYLRRRQGR---EVASYPSDEVRGVLERTLGVPIFQEQVMQL 653

Query: 664  AITAAGFSPSEADRLRRAMATFKRTGTIHTFERKMVEGMVANDYEREFAERCFNQIKGFG 723
            A+ AAGF+  EAD+LRR+M  ++R GT+  F  +++ GM    Y   FA++ F  I+GFG
Sbjct: 654  AVVAAGFTAGEADQLRRSMGAWERHGTLEHFRARLLSGMTGRGYAPAFADQVFEMIRGFG 713

Query: 724  EYGFPESHAASFASLVYASAWLKTYYPDIFCAALLNAQPMGFYAPAQLVRDAREHGVRML 783
             YGFPESHAASFA L YASA+LK +YP  F AALLN+QPMGFY   QL +DAR HG+ + 
Sbjct: 714  AYGFPESHAASFALLAYASAYLKAHYPSAFLAALLNSQPMGFYTTDQLAQDARRHGIEIR 773

Query: 784  PVDINHSDWDALLEGEGAFDKNAVHPRHASMREVIKTRKAVRLGFRLVKGLK-QTDMKAL 842
            P D+  S W++ LEGEGA                   R  +RLG R + GL+ ++  + L
Sbjct: 774  PPDVRVSGWESHLEGEGA-------------------RAPIRLGLREISGLRAESAARLL 814

Query: 843  VARRGEGYRSVHDLWLRSGLSRSVLERLADADAFRSIGLDRRAALWAVKALDEQSAVERL 902
             ARR   ++ + D+  R+ L +  L  LADA A +S+   R  A W    ++       L
Sbjct: 815  QARREAPFKDLSDVARRAALDQRDLPLLADAGALQSLAGHRHVARWVASGVE-----ATL 869

Query: 903  PLFEGAGSDDLQIEPKVALPDMPAGEQVIHDYRTLTLSLKAHPVSFMREDFSRRGILRSR 962
            PLF G        E  VAL    AGE++  DY ++ LS  +HP++ +R            
Sbjct: 870  PLFGGTA------EATVALRAPTAGEEMAADYASMGLSTGSHPMALLRSSLLGSSYATLA 923

Query: 963  DLAATATGRWVTVAGLVLVRQRPGSANGVIFMTIEDETGIANIIVWEKTFQKYRRQVMGS 1022
            + A     + + VAGL+ +RQ P +A GV F+T+EDETG  N++VW    ++ R+ +  +
Sbjct: 924  EAARAGHRKRIRVAGLIGMRQSPPAAGGVTFLTLEDETGWLNVVVWRDVAEQCRQALRSA 983

Query: 1023 RLVKVRGRLQNQSGVIHVVA 1042
              V V GR+++  GV H++A
Sbjct: 984  GPVVVDGRIEHADGVTHLIA 1003