Pairwise Alignments

Query, 1116 a.a., DNA polymerase III subunit alpha from Sinorhizobium meliloti 1021

Subject, 1026 a.a., error-prone DNA polymerase from Rhodanobacter sp000427505 FW510-R12

 Score =  849 bits (2193), Expect = 0.0
 Identities = 505/1062 (47%), Positives = 646/1062 (60%), Gaps = 46/1062 (4%)

Query: 7    FCELGARTNFSFLEGAAPAEEMVVFAKKAGLAGLGIADRNSVAGVVRAHAKAKVEGYPFQ 66
            + EL   ++FSF  GA+ A E+   A+  G + L I D  S+AG+VRA+  +   G    
Sbjct: 4    YAELHCLSDFSFGRGASNAAELFERARACGYSALAITDECSLAGIVRAYQASNETGLKLI 63

Query: 67   PGARLVFADGTPDILAYPKNRRGWGHLCRLLSAGNLRSKKGDCTLHLADLLEWQEELLLI 126
             GA     DG P ++   +NR+G+  LCRL++ G   S KG   L  ADL       L +
Sbjct: 64   VGAEFQLEDG-PKLVLLCENRQGYAELCRLITRGRRASGKGTYRLTCADLESGMPGTLAL 122

Query: 127  VMQGEGRPEPESLEVLLGTLKEHAGNRLYLGLAPHYDGFDRHDFAVLAAIARKAGIGLLA 186
             M G          +     +   G+R +L +  H    D      L A+     + L A
Sbjct: 123  WMPGLQADTAHGRWI-----RATFGDRAWLAVELHRGPDDVGRLCELQALGHALDLPLAA 177

Query: 187  TNDALYHDPHYRPLADVVTSIREHVPIAGAGFLLQKNAERHLKGPREMARLFSDYPEAIA 246
            + D   H      L   +T+IR  VPIA AG L+ +N ERHL+    +A +   YP A+ 
Sbjct: 178  SGDVHMHVRRRLALQHTLTAIRHRVPIAEAGALIFRNGERHLRRRDVLAGI---YPAALM 234

Query: 247  NTR-KFFRELAFSLDELSHQYPDENA-DGETPAESLRRLVAEGAAERYPEGVPEKVMRQI 304
                +      F + EL + YP E   DG TPA  LR+L  EG   R+P+G   KV + I
Sbjct: 235  QESVRIAERCTFHMGELKYDYPTELVPDGHTPASWLRQLAEEGIRWRWPQGASAKVRKLI 294

Query: 305  DYELELIHDKKYEPYFLTVHKLVKFARSVNILCQGRGSAANSSVCFCLGITDVDPQKFTL 364
            D EL LI  K+YE +FLTVH +V+FAR   ILCQGRGSAANS+VCF LG+T+VDP+   L
Sbjct: 295  DDELALIASKQYEAFFLTVHDIVRFARGEGILCQGRGSAANSAVCFALGVTEVDPEVNHL 354

Query: 365  LFDRFLSKDRDEPPDIDVDFEHERREEVIQYIYRTYGKEHAGLTAAVISYRSRSAGREVA 424
            L  RF+S+DRDEPPDIDVDFEHERREEVIQYIY  YG+E A L A VI YR RSA R+VA
Sbjct: 355  LVARFISEDRDEPPDIDVDFEHERREEVIQYIYGKYGRERAALAATVICYRGRSAVRDVA 414

Query: 425  KAFGLSEDVQSALVSSIW--GWGTSPFTEEQAKGAGLDAADPLTRRVLAYASLLMNFPRH 482
            KA GL  D Q   +S ++  GWG S   +E+ +  G D   P+ RRVL     L+  PRH
Sbjct: 415  KALGLPLD-QIDRLSDVFARGWGDSK-ADERLREQGFDPDSPIIRRVLKLTYELLGMPRH 472

Query: 483  LSQHVGGFVITRDRLDEVVPIMNTAMPDRYMIEWDKDDLDELKILKVDVLALGMLTCLAK 542
            LSQHVGGFVI+   L E+VP+ N AMPDR +I+W+KDDLD +++LKVD LALGMLTCL K
Sbjct: 473  LSQHVGGFVISDTSLSEMVPVENAAMPDRTVIQWEKDDLDYMRMLKVDCLALGMLTCLRK 532

Query: 543  GFKLLEAHYGEPITLAEIYQDHRDAVYDMICRADTVGVFQIESRAQMSMLPRLQPREMYD 602
             F LLE+ +G   T+A I    R A Y+MI RADTVGVFQIESRAQM+MLPR +P   YD
Sbjct: 533  CFGLLESGHGVAKTIATIEPGDR-ATYEMIQRADTVGVFQIESRAQMAMLPRHRPANFYD 591

Query: 603  LVIEVAIVRPGPIQGNMVHPYLKRREAQRRGEAVVYPSPELKAVLERTLGVPLFQEQAMQ 662
            LVI+VAIVRPGPIQG+MVHPYL+RR  +   E V YPSP+ K VLERTLGVPLFQEQ M+
Sbjct: 592  LVIQVAIVRPGPIQGDMVHPYLRRRNKE---EVVDYPSPQFKDVLERTLGVPLFQEQVMK 648

Query: 663  IAITAAGFSPSEADRLRRAMATFKRTGTIHTFERKMVEGMVANDYEREFAERCFNQIKGF 722
            +AI AA F+ SEAD+LRR+MA +KR G +     K+++GM+ N Y   FA R F QIKGF
Sbjct: 649  LAIVAADFTDSEADKLRRSMAAWKRHGGLEPHRDKLMQGMLKNGYTAAFAARIFEQIKGF 708

Query: 723  GEYGFPESHAASFASLVYASAWLKTYYPDIFCAALLNAQPMGFYAPAQLVRDAREHGVRM 782
            G YGFPESHAASFA+LVYAS WLK +YP  F  ALLNAQPMGFY P+Q+V+D R H V +
Sbjct: 709  GSYGFPESHAASFANLVYASCWLKCHYPAAFACALLNAQPMGFYGPSQIVQDVRRHRVAV 768

Query: 783  LPVDINHSDWDALLEGEGAFDKNAVHPR-HASMREVIKTRKAVRLGFRLVKGLKQTDMKA 841
             PVD+  SDWD  LE +         PR HA  R       A+RLG R+V+G  +     
Sbjct: 769  RPVDVRFSDWDCTLEPD---------PRGHADAR-------AIRLGLRMVRGCSEAAALR 812

Query: 842  LVARRG-EGYRSVHDLWLRSGLSRSVLERLADADAFRSIGLDRRAALWAVKALDEQSAVE 900
            L+A RG + +  V DL  R+GL R   E LADA A R +   R  A WAV  ++ Q    
Sbjct: 813  LMAARGRQPFADVTDLCSRAGLDRRHQELLADAAALRGLAGHRHRARWAVAGVEPQ---- 868

Query: 901  RLPLFEGAGSDDLQIEPKVALPDMPAGEQVIHDYRTLTLSLKAHPVSFMREDFSRRGILR 960
             LPLF   GS+    E  VALP     E  + DY  + LSL AHP+  +R   +    + 
Sbjct: 869  -LPLF---GSES-PGERAVALPLPTQAEDTLADYARVGLSLGAHPLRQIRARLNAAHCMD 923

Query: 961  SRDLAATATGRWVTVAGLVLVRQRPGSANGVIFMTIEDETGIANIIVWEKTFQKYRRQVM 1020
             + L        V VAGLV  RQ+P +A+G+IF+T+EDE G+ N+IV  +  +  RR ++
Sbjct: 924  GKTLRRQPHHSRVRVAGLVTSRQQPQTASGIIFVTLEDEHGLINVIVRRQVAEAQRRALL 983

Query: 1021 GSRLVKVRGRLQNQSGVIHVVADHLEDITPMLGLLRREARRF 1062
             +RL+ V G+ +N   V H++A  L D+TP+LG L   +R F
Sbjct: 984  QARLLAVEGQWENVDRVSHLIAHRLRDLTPLLGALDARSRDF 1025