Pairwise Alignments

Query, 1116 a.a., DNA polymerase III subunit alpha from Sinorhizobium meliloti 1021

Subject, 1039 a.a., error-prone DNA polymerase from Paraburkholderia sabiae LMG 24235

 Score =  838 bits (2166), Expect = 0.0
 Identities = 481/1081 (44%), Positives = 659/1081 (60%), Gaps = 78/1081 (7%)

Query: 7    FCELGARTNFSFLEGAAPAEEMVVFAKKAGLAGLGIADRNSVAGV---VRAHAKAKVEGY 63
            + EL   +NF+FL GA+ AEE+   A + G   + I D  S+AG+   V AH        
Sbjct: 11   YAELQCASNFTFLHGASHAEELAARAAQLGYEAIAITDECSLAGIKLLVGAHF------- 63

Query: 64   PFQPGARLVFADGTPDIL--AYPKNRRGWGHLCRLLSAGNLRSKKGDCTLHLADL----- 116
                  R+  ADG+P +   A  +NR G+G+L  L++    R+ KG   ++  DL     
Sbjct: 64   ------RVTNADGSPALAFTAIAQNRDGYGNLSELITLARTRTAKGTYVVYPHDLDHPDP 117

Query: 117  ----LEWQEELLLIVMQGEGRPEPESLEVLLGTLKEHAG-----NRLYLGLAPHYDGFDR 167
                L    + L+I+      PE  + +  L    + A      +R ++GL  H    D 
Sbjct: 118  PYTHLRALPDCLIILT-----PEFPAKDARLDAQAQWAAQTFGTDRCWMGLTLHARALDD 172

Query: 168  HDFAVLAAIARKAGIGLLATNDALYHDPHYRPLADVVTSIREHVPIAGAGFLLQKNAERH 227
                 +  +A + G+  +AT   L H    +PL D +T+IR + P+   GF L  NAE+H
Sbjct: 173  LHRNTVYDVAERHGLSAVATGQVLMHVRSRKPLQDTLTAIRLNRPVTECGFELTPNAEQH 232

Query: 228  LKGPREMARLFSDYPEAIANTRKFFRELAFSLDELSHQYPDENAD-GETPAESLRRLVAE 286
            L+    +A ++    +++A T        F LDEL ++YPDE    G TP   LRR    
Sbjct: 233  LRSRLRLANVYQ--ADSLAQTLNIASRCTFVLDELRYEYPDELVPPGTTPTAYLRRETYL 290

Query: 287  GAAERYPEGVPEKVMRQIDYELELIHDKKYEPYFLTVHKLVKFARSVNILCQGRGSAANS 346
            GA  RYP G+P  V  QI++EL LI D KYEPYFLTV+ +V+FAR+  ILCQGRGSAANS
Sbjct: 291  GAHRRYPRGIPHIVQTQIEHELSLIADLKYEPYFLTVYDIVRFARNEGILCQGRGSAANS 350

Query: 347  SVCFCLGITDVDPQKFTLLFDRFLSKDR---DEPPDIDVDFEHERREEVIQYIYRTYGKE 403
            ++C+CLGIT+VDP +  LLF+RF+S++R    + PDID DFEH+RREEVIQYIY  Y + 
Sbjct: 351  AICYCLGITEVDPARGNLLFERFISRERAAAGDVPDIDTDFEHQRREEVIQYIYGKYTRT 410

Query: 404  HAGLTAAVISYRSRSAGREVAKAFGLSEDVQSALVSSIWGWGTSPFTEEQAKGAGLDAAD 463
             A L AAV +YR RSA R+  KA G+   +   +      + +S     +   +GLD+  
Sbjct: 411  RAALAAAVTTYRPRSAIRDSGKALGIDPLIVDRVAKEHHWFDSSADLMRRFVDSGLDSET 470

Query: 464  PLTRRVLAYASLLMNFPRHLSQHVGGFVITRDRLDEVVPIMNTAMPDRYMIEWDKDDLDE 523
            P+ ++    A+ L+ FPRHLSQHVGGFVI R +L  +VP+ N +MPDR +I+WDKDDL+ 
Sbjct: 471  PIIQQWATLAATLLGFPRHLSQHVGGFVIARGKLSRLVPLENASMPDRTVIQWDKDDLEA 530

Query: 524  LKILKVDVLALGMLTCLAKGFKLLEAHYGEPITLAEIYQDHRDAVYDMICRADTVGVFQI 583
            L +LK+DVLALGML+ + +  +L+    GEP  + +I  +  +A YDMIC ADTVGVFQI
Sbjct: 531  LGLLKIDVLALGMLSAIRRTLELVSQQRGEPFEMQDIPAED-EATYDMICAADTVGVFQI 589

Query: 584  ESRAQMSMLPRLQPREMYDLVIEVAIVRPGPIQGNMVHPYLKRREAQRRGEAVVYPSPEL 643
            ESRAQMSMLPRL+PRE YDLVIEVAIVRPGP+QG MVHPYL+RR+     E V YPS E+
Sbjct: 590  ESRAQMSMLPRLRPREFYDLVIEVAIVRPGPVQGGMVHPYLRRRQGL---EPVSYPSAEV 646

Query: 644  KAVLERTLGVPLFQEQAMQIAITAAGFSPSEADRLRRAMATFKRTGTIHTFERKMVEGMV 703
            +  L+RTLGVP+FQEQ MQ+A+ AAGFS  EAD+LRRAMA +KR G +  +  ++VEGM+
Sbjct: 647  EQALKRTLGVPIFQEQVMQVAMLAAGFSAGEADQLRRAMAAWKRKGGLQHYHDRIVEGML 706

Query: 704  ANDYEREFAERCFNQIKGFGEYGFPESHAASFASLVYASAWLKTYYPDIFCAALLNAQPM 763
               Y+REFAE  F QI+GFGEYGFPESHAASFA LVYAS WLK + P  F  A+LN+QPM
Sbjct: 707  QRGYDREFAESIFAQIQGFGEYGFPESHAASFALLVYASCWLKRHEPAAFLCAMLNSQPM 766

Query: 764  GFYAPAQLVRDAREHGVRMLPVDINHSDWDALLEGEGAFDKNAVHPRHASMREVIKTRKA 823
            GFY+P+QLV+DA+ HGV +LPVD+  SDWD+ +EG+G+                      
Sbjct: 767  GFYSPSQLVQDAKRHGVGVLPVDVTVSDWDSTMEGDGSM-------------------AP 807

Query: 824  VRLGFRLVKGLK-QTDMKALVARRGEGYRSVHDLWLRSGLSRSVLERLADADAFRSIGLD 882
            VRLG  +V+G++ +T  +   AR  + +R V DL  R+ L R  L+ LA A+A + +  D
Sbjct: 808  VRLGMSVVRGMREETAQRIEAARAVKLFRDVADLANRAQLDRHDLQVLAAANALKPLAGD 867

Query: 883  RRAALW-AVKALDEQSAVERLPLFEGAGSDDLQIEPKVALPDMPAGEQVIHDYRTLTLSL 941
            RR ALW AV A+ E+  +      E A        P +  P    G+ +I DYR+  L+L
Sbjct: 868  RRQALWAAVAAVPEKDLLRATAREEEA--------PNLVAP--TEGQNLIADYRSTGLTL 917

Query: 942  KAHPVSFMREDFSRRGILRSRDLAATATGRWVTVAGLVLVRQRPGSANGVIFMTIEDETG 1001
              HP++ +R+      ++ +  L     G+     G+V VRQRPG+ANGV+FMT+EDETG
Sbjct: 918  GRHPLALLRKKLLTMRLMSAETLMRYRDGQLARACGIVTVRQRPGTANGVMFMTLEDETG 977

Query: 1002 IANIIVWEKTFQKYRRQVMGSRLVKVRGRLQNQSGVIHVVADHLEDITPMLGLLRREARR 1061
              N+IVW+   ++ RR+ +GS L+ V G  Q Q  V H+VA  L D++ +LG L   +R 
Sbjct: 978  SVNVIVWQSVLERQRREALGSSLLAVYGVWQRQGDVKHLVAQRLVDVSHLLGELPTASRN 1037

Query: 1062 F 1062
            F
Sbjct: 1038 F 1038