Pairwise Alignments

Query, 1116 a.a., DNA polymerase III subunit alpha from Sinorhizobium meliloti 1021

Subject, 1160 a.a., DNA polymerase III subunit alpha from Escherichia coli ECRC100

 Score =  343 bits (880), Expect = 4e-98
 Identities = 297/1098 (27%), Positives = 518/1098 (47%), Gaps = 86/1098 (7%)

Query: 7    FCELGARTNFSFLEGAAPAEEMVVFAKKAGLAGLGIADRNSVAGVVRAHAKAKVEGYPFQ 66
            F  L   +++S ++G A    +V  A   G+  L I D  ++ G+V+ +      G    
Sbjct: 6    FVHLRVHSDYSMIDGLAKTAPLVKKAAALGMPALAITDFTNLCGLVKFYGAGHGAGIKPI 65

Query: 67   PGARL-----VFADGTPDILAYPKNRRGWGHLCRLLSAGNLRSKKGDCTLHLAD-LLEWQ 120
             GA       +  D    +     N  G+ +L  L+S    R       +   D L+E  
Sbjct: 66   VGADFNVQCDLLGDELTHLTVLAANNTGYQNLTLLISKAYQRGYGAAGPIIDRDWLIELN 125

Query: 121  EELLLIVMQGEG-------RPEPESLEVLLGTLKEHAGNRLYLGLAPHYDGFDRHDFAVL 173
            E L+L+     G       R     ++  +   +EH  +R +L L       +       
Sbjct: 126  EGLILLSGGRMGDVGRSLLRGNSALVDECVAFYEEHFPDRYFLELIRTGRPDEESYLHAA 185

Query: 174  AAIARKAGIGLLATNDALYHDPHYRPLADVVTSIREHVPIAGAGFLLQKNAERHLKGPRE 233
              +A   G+ ++ATND  + D       ++  +I +   +         + +++++   E
Sbjct: 186  VELAEARGLPVVATNDVRFIDSSDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYMRSEEE 245

Query: 234  MARLFSDYPEAIANTRKFFRELAFSLDELSHQYPDENADGETPAESLRRLVAEGAAERYP 293
            M  LF+D PEA+ANT +  +    ++    +  P       +  + L +   EG  ER  
Sbjct: 246  MCELFADIPEALANTVEIAKRCNVTVRLGEYFLPQFPTGDMSTEDYLVKRAKEGLEERLA 305

Query: 294  EGVP---EKVMRQIDY------ELELIHDKKYEPYFLTVHKLVKFARSVNI-LCQGRGSA 343
               P   E+V R+ +Y      EL++I+   +  YFL V + +++++   + +  GRGS 
Sbjct: 306  FLFPDEEERVKRRPEYDERLETELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGPGRGSG 365

Query: 344  ANSSVCFCLGITDVDPQKFTLLFDRFLSKDRDEPPDIDVDFEHERREEVIQYIYRTYGKE 403
            A S V + L ITD+DP +F LLF+RFL+ +R   PD DVDF  E+R++VI+++   YG++
Sbjct: 366  AGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVADMYGRD 425

Query: 404  HAG--LTAAVISYRS--RSAGREVAKAFGLSEDVQSALVSSIWGWGTSPFTEEQAKGAGL 459
                 +T   ++ ++  R  GR +   +G  + + S L+    G   +   E + +   +
Sbjct: 426  AVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRI-SKLIPPDPGMTLAKAFEAEPQLPEI 484

Query: 460  DAADPLTRRVLAYASLLMNFPRHLSQHVGGFVITRDRLDEVVPIMNTAMPDRYMIEWDKD 519
              AD   + ++  A  L    R+  +H GG VI   ++ +  P+         + ++DK 
Sbjct: 485  YEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEEGKHPVTQFDKS 544

Query: 520  DLDELKILKVDVLALGMLTCLAKGFKLL---EAHYGE-PITLAEIYQDHRDAVYDMICRA 575
            D++   ++K D L L  LT +    +++    A  GE P+ +A I  D + + +DM+ R+
Sbjct: 545  DVEYAGLVKFDFLGLRTLTIINWALEMINKRRAKNGEPPLDIAAIPLDDKKS-FDMLQRS 603

Query: 576  DTVGVFQIESRAQMSMLPRLQPREMYDLVIEVAIVRPGPIQGNMVHPYLKRREAQRRGEA 635
            +T  VFQ+ESR    ++ RLQP    D++  VA+ RPGP+Q  MV  ++ R+  +   E 
Sbjct: 604  ETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGR---EE 660

Query: 636  VVYPSPE-----LKAVLERTLGVPLFQEQAMQIAITAAGFSPSEADRLRRAMATFKRTGT 690
            + YP  +     LK VLE T G+ L+QEQ MQIA   +G++   AD LRRAM   K+   
Sbjct: 661  ISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGK-KKPEE 719

Query: 691  IHTFERKMVEGMVANDYEREFAERCFNQIKGFGEYGFPESHAASFASLVYASAWLKTYYP 750
            +        EG   N    E A + F+ ++ F  YGF +SH+A++A + Y + WLK +YP
Sbjct: 720  MAKQRSVFAEGAEKNGINAELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYP 779

Query: 751  DIFCAALLNAQPMGFYAPAQLVRDAREHGVRMLPVDINHSDWDALLEGEGAFDKNAVHPR 810
              F AA++ A          LV +    G+++LP DIN   +   +  +G          
Sbjct: 780  AEFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDG---------- 829

Query: 811  HASMREVIKTRKAVRLGFRLVKGLKQTDMKALVARRGEG--YRSVHDLWLRSG---LSRS 865
                 E++        G   +KG+ +  ++A++  R +G  +R + DL  R+    L+R 
Sbjct: 830  -----EIV-------YGIGAIKGVGEGPIEAIIEARNKGGYFRELFDLCARTDTKKLNRR 877

Query: 866  VLERLADADAFRSIGLDRRAALW-----AVKALDEQS---AVERLPLFEGAGSDDLQIEP 917
            VLE+L  + AF  +G   RAAL      A+KA D+ +   A+ +  +F     +  QIE 
Sbjct: 878  VLEKLIMSGAFDRLG-PHRAALMNSLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQ 936

Query: 918  KVALPDMPAGEQVIHD--YRTLTLSLKAHPVS-FMREDFSRRGILRSRDLAATATGRWVT 974
              A    P  EQV+ D    TL L L  HP++ +++E     G +R +D+  T  G+ +T
Sbjct: 937  SYA-SCQPWPEQVVLDGERETLGLYLTGHPINQYLKEIERYVGGVRLKDMHPTERGKVIT 995

Query: 975  VAGLVLVRQRPGSANG--VIFMTIEDETGIANIIVWEKTFQKYRRQVMGSRLVKVRGRL- 1031
             AGLV+  +   +  G  +   T++D +G   ++++     KY+  +   R++ V G++ 
Sbjct: 996  AAGLVVAARVMVTKRGNRIGICTLDDRSGRLEVMLFTDALDKYQHLLEKDRILIVSGQVS 1055

Query: 1032 -QNQSGVIHVVADHLEDI 1048
              + SG + + A  + DI
Sbjct: 1056 FDDFSGGLKMTAREVMDI 1073