Pairwise Alignments

Query, 537 a.a., transposase number 3 for insertion sequence ISRM26 from Sinorhizobium meliloti 1021

Subject, 550 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  380 bits (976), Expect = e-110
 Identities = 220/538 (40%), Positives = 315/538 (58%), Gaps = 25/538 (4%)

Query: 9   PDDVDALKAMVLALAREQAAKEVRLKVAEIARLEAVEKSANERIANLTLIMKVLQRTQNG 68
           P+ V A  AM   L+ E+AA++    V  +A  +A      E +  L   +   +RT+ G
Sbjct: 15  PEVVKAFAAMQFELSVERAARQHEQAV--VAEKDAFIAELKELVEKLEGQVHDYRRTKFG 72

Query: 69  KRSERLRLGVNDEQVSFAFEEVETGLS-------AIRSELDRAAKDKPKRAPRPRKGFAA 121
            +SE+L    +  Q+  A E++ET ++       A+  +++ +A D  K APR  +   A
Sbjct: 73  PKSEKL----DPAQMELALEDLETAIAETQARIAAVEKKIEASASDPEKVAPRKERKARA 128

Query: 122 ---HLERIEEVIEPE---IPAGCEGLAKVLIGEDRSERLDVVPPKFRVIVTRRPKYAF-R 174
              HL R+E VIEPE    P GC  + +  IGEDR+ERLD VP ++ VIVT RPKYA  +
Sbjct: 129 LPEHLPRVERVIEPESIVCPCGCGNMVR--IGEDRTERLDRVPARYEVIVTIRPKYACPK 186

Query: 175 GSDGVVQALAPAHIIEGGLPTERLLAYIAVSKYADGLPLYRQEAIYLRDGVEISRSLMAQ 234
           G  GVVQA APAH++EG  PTE LLA IAVSK+++ +PL RQ  +  R GV I R+++A 
Sbjct: 187 GRTGVVQARAPAHLLEGSWPTEALLAEIAVSKHSEHMPLNRQAEVMARHGVPIDRTVLAD 246

Query: 235 WMGHLGFELQMLADYILERVK-EGERIFADETTLPTLAPGSGKTTKAWLWAYARDDRPYG 293
           WMG  G  +  + D++ +R+  E  R++ DETT P L PG GKT   +LWA  RDDR + 
Sbjct: 247 WMGRTGAAIAPVVDHMAKRLLWESTRLYVDETTAPVLDPGRGKTKTGYLWAVLRDDRGWN 306

Query: 294 GTSPPMVAYRFEDSRGADCVTRHLSGFTGILQVDGYSAYTNLAKTRAKTGSNETVQLAGC 353
           G++PP V + +   R  +     L GF G +QVD Y  Y++LA T  + G  + ++LA C
Sbjct: 307 GSAPPGVVFHYRPGRKGEYAAEILDGFNGTIQVDAYGGYSHLA-TLDRVGG-DPLKLAFC 364

Query: 354 WAHLRRKFYDLHISGVSQAATDTVLAMTELWRIEDEVRGKDADSRAARRQEKSSTTAASL 413
           WAH RRK         S    + ++ +  L++IED +RG D + R A RQ+ S     + 
Sbjct: 365 WAHGRRKLIKATPKSGSPIVDEALVRIAALYKIEDSIRGSDPEHRRAVRQDLSLPLVGAF 424

Query: 414 FELWEKELGKVSGKSKTAEAIRYALTRREALERFLTDGRIEIDSNIVERAIRPQTITRKN 473
           F     +  +VS KS   +A+ Y LTR++    FL DG ++IDSN+VE AIR   + R+N
Sbjct: 425 FAWLAAQAKRVSRKSDLGKALAYMLTRQDGFRLFLDDGHVDIDSNLVENAIRRPAMNRRN 484

Query: 474 SLFAGSEGGGRTWAAVATLLQTCKMNGVDPLDWLSQTLTRIAQGWPASEIEALMPWNF 531
           +LFAG + GGR WA  A+L+ TCKMNGV+P  +L    TR+A G  A +I+ALMPW +
Sbjct: 485 ALFAGHDEGGRNWARFASLIGTCKMNGVEPYAYLCDLFTRLANGHLAKDIDALMPWAY 542