Pairwise Alignments

Query, 409 a.a., integrase DNA protein from Sinorhizobium meliloti 1021

Subject, 395 a.a., tyrosine-type recombinase/integrase from Dickeya dianthicola ME23

 Score =  121 bits (304), Expect = 3e-32
 Identities = 112/397 (28%), Positives = 181/397 (45%), Gaps = 21/397 (5%)

Query: 2   PINKLTDKQVRGIKKPGNHPDGGNLYLRVRENGSKSFIVKATIDKKQREWTIGSYGSEEH 61
           P+  +  ++ +   K     DG  L+L V+  G K +  +       +   IG +G+   
Sbjct: 7   PLTHIEVQKAKAADKDLTLHDGNGLFLLVKTTGKKLWRFRYQKPTTGQRTMIG-FGAYPA 65

Query: 62  HFSLAEARKRRDEIMAVIRAGGISEPTGKSVTQSVEPESTTFPAPLFGPFSIELIQQIEG 121
             SLA+ R  RDE ++++  G   +P  K   +  E +       +    S   ++Q   
Sbjct: 66  -LSLADVRAMRDEKLSLLAKG--IDPQEKVAKEVEEAQIAVESLFINVARSWFTLKQATV 122

Query: 122 GFRNAKHRAQWRSTLETYCKSIWEKRVDRITTDDVLAILRPIWSTKA-ETASRVRGRIER 180
              +AK    WRS  +    +I    V +I    ++  L PI +  A ET  R+  RI  
Sbjct: 123 STDHAKDI--WRSLEKDVLPAIENIPVQQIKARTLIQALEPIKARGALETVRRLVQRINE 180

Query: 181 VLNAAKVRGFRSGENPAAWQGHLQLLLPKRQKLQRGHHPALPFQDLPTLWQKL--TSIDT 238
           ++  A   G     NPA+  G +    PK+Q     H P +  ++LP L + +  +++  
Sbjct: 181 IMVYAVNTGLIDA-NPASGIG-MAFERPKKQ-----HMPTIRPEELPALMRTIAMSNLSI 233

Query: 239 IASAALQFLILTAARSGELRGAKWEEFDLEKRLWTIPASRMKAAREHLVPLSDSCIEILK 298
                L++ +LT  R  E     W E D+EK+ W+IPA RMKA R+H+VPLS+  +E+L 
Sbjct: 234 PTRCLLEWQLLTLIRPAEASATAWAEIDIEKKTWSIPAERMKAKRDHIVPLSEQALELLD 293

Query: 299 RMQKIR-HSDFVFPGTRE-HAPLSDMTLSKVLHGLCKG--YTVHGFRSTFRDWCGEKTDF 354
            M+ I  + D+VFP   +   P++  T +  L  +  G     HG RS       E   F
Sbjct: 294 IMRPISGNRDYVFPSRNDPKKPMNSQTANAALKRIGYGGKLVAHGLRSIASTAMNE-AGF 352

Query: 355 SREHAEACLAHTIGSAVERAYRRGNSLEPRRRIMTAW 391
           + +  E+ LAH   + V RAY R   LE R+ +M  W
Sbjct: 353 NPDVIESALAHCDKNEVRRAYNRSTYLEQRKELMDWW 389