Pairwise Alignments

Query, 409 a.a., integrase DNA protein from Sinorhizobium meliloti 1021

Subject, 419 a.a., integrase arm-type DNA-binding domain-containing protein from Dickeya dianthicola 67-19

 Score =  113 bits (283), Expect = 9e-30
 Identities = 115/422 (27%), Positives = 184/422 (43%), Gaps = 48/422 (11%)

Query: 6   LTDKQVRGIK---KPGNHPDGGNLYLRVRENGSKSFIVKATIDKKQREWTIGSYGSEEHH 62
           LTD +VR  K   K     D   LYL V  +G+K +  +  +  K+     G Y      
Sbjct: 2   LTDSKVRSAKPLAKSYKLTDSQGLYLTVSASGAKLWYFRYRLGGKESRLAFGPYPQT--- 58

Query: 63  FSLAEARKRRDEIMAVIRAGGISEPTGKSVTQSVEPESTTFP--APLFGPFSIELIQQIE 120
            +LAEAR++RD    ++ A GIS    +        ES TF   A  +   S++L     
Sbjct: 59  -TLAEAREKRDAARKLL-ASGISPSQLRKANNPAVDESRTFQYVAQAWHTSSLKLWSDA- 115

Query: 121 GGFRNAKHRAQWRSTLETYC-KSIWEKRVDRITTDDVLAILRPIWSTKA-ETASRVRGRI 178
                  H  +    L+ Y   +I    + ++ T  +  +++ I      + A RVR  +
Sbjct: 116 -------HADKILICLKRYVFPTIGVMDIAQVETRHLAQLVKAIDDKGVHDVAGRVRQHL 168

Query: 179 ERVLNAAKVRGFRSGENPAAWQGHLQLLLPKRQKLQRGHHPALPFQDLPTLWQKLTSID- 237
            +++  A  +G           G +  ++ +       HHPALP + LP L  K+ S   
Sbjct: 169 TKIMRHAVQQGVIKYNPAYDLDGVVTPVVTQ-------HHPALPLKRLPELLAKIGSYKG 221

Query: 238 -TIASAALQFLILTAARSGELRGAKWEEFDLEKRLWTIPASR------------MKAARE 284
             +   AL+  +    RS ELR A+W+EF+L+  +W++PA R             K   E
Sbjct: 222 RMLTRLALELNLHVFLRSSELRFARWDEFNLKAHIWSVPARREAVNSVRFSARGAKMKDE 281

Query: 285 HLVPLSDSCIEILKRMQKIR-HSDFVFPGTRE-HAPLSDMTLSKVL----HGLCKGYTVH 338
           HLVPLS   + +LK++Q I   S FVFP     + P+S+ T++K L    +G       H
Sbjct: 282 HLVPLSRQAVALLKQIQAISGESVFVFPSAHTLNKPMSENTINKALRVIGYGTKSEVCGH 341

Query: 339 GFRSTFRDWCGEKTDFSREHAEACLAHTIGSAVERAY-RRGNSLEPRRRIMTAWEAFILT 397
           GFR+       E   +S++  E  ++H   + V  AY  +   LE R  +M  W  ++  
Sbjct: 342 GFRTMACSALNESGRWSKDAIERQMSHKERNGVRAAYVHKAEHLEARIEMMQWWSDYLDV 401

Query: 398 GR 399
            R
Sbjct: 402 NR 403