Pairwise Alignments

Query, 409 a.a., integrase DNA protein from Sinorhizobium meliloti 1021

Subject, 418 a.a., integrase arm-type DNA-binding domain-containing protein from Dickeya dianthicola 67-19

 Score =  119 bits (298), Expect = 2e-31
 Identities = 118/422 (27%), Positives = 186/422 (44%), Gaps = 46/422 (10%)

Query: 6   LTDKQVRGIK---KPGNHPDGGNLYLRVRENGSKSFIVKATIDKKQREWTIGSYGSEEHH 62
           LTD   R  K   K     D   LYL V  NGSK + +K   + K+     G+Y      
Sbjct: 3   LTDVVARTAKPREKAYKLADAHGLYLLVSPNGSKHWYLKYRFEGKESRIAFGAYPL---- 58

Query: 63  FSLAEARKRRDEIMAVIRAGGISEPTGKSVTQSVEPESTTFPAPLFGPFSIELIQQIEGG 122
            SLA+AR++RDE+  ++ A GI+ P  K   +  E ++       F   + +  + I   
Sbjct: 59  ISLAKAREKRDEVRLLL-ADGIN-PAEKREEEKEEAQAALIT---FEKVARDWHRNISQN 113

Query: 123 FRNAKHRAQ-WRSTLETYCKSIWEKRVDRITTDDVLAILRPIWST-KAETASRVRGRIER 180
             +  H  + WR        +I  + +  + T D+L  L+ +      + ASR+R R+  
Sbjct: 114 RWSETHAGRVWRDMERNILPAIGHRHIADLKTKDLLEPLKAVEQNGHLDLASRLRQRVTD 173

Query: 181 VLNAAKVRGFRSGENPAAWQGHLQLLLPKRQKLQRGHHPALPFQDLPTLWQKLTSID--T 238
           ++  A V+      NPA  Q     + P +      H PAL    LP    ++ S     
Sbjct: 174 IMRYA-VQNDLIERNPA--QDLSGAIAPPKAT----HRPALKLDKLPDFLARIESYKGRA 226

Query: 239 IASAALQFLILTAARSGELRGAKWEEFDLEKRLWTIPASR------------MKAAREHL 286
           + + AL+F +    RS ELR A+W E D ++ +WTIPA R             K   EHL
Sbjct: 227 LTTLALKFTLCVFIRSSELRFARWTEIDFKRAMWTIPAEREAIPGVKHSQRGAKMRTEHL 286

Query: 287 VPLSDSCIEILKRMQKIRHS-DFVFPGTREHA-PLSDMTLSKVLHGLCKGYTV------H 338
           VPLS   + +LK ++ I    + +FPG R    P+S+ T++  L  +  GY        H
Sbjct: 287 VPLSRQGLALLKEIKAISGGHELIFPGDRRPTKPMSENTVNNALRVM--GYDTTTELCGH 344

Query: 339 GFRSTFRDWCGEKTDFSREHAEACLAHTIGSAVERAY-RRGNSLEPRRRIMTAWEAFILT 397
           GFR+       E   +SR+  E  ++H   + V  AY  +   +E RR ++  W  ++  
Sbjct: 345 GFRTMACSALVESGQWSRDAVERQMSHQERNGVRAAYIHKAEHIEERRLMLQWWADYLDA 404

Query: 398 GR 399
            R
Sbjct: 405 NR 406