Pairwise Alignments

Query, 409 a.a., integrase DNA protein from Sinorhizobium meliloti 1021

Subject, 404 a.a., tyrosine-type recombinase/integrase from Dickeya dadantii 3937

 Score =  135 bits (341), Expect = 2e-36
 Identities = 129/411 (31%), Positives = 189/411 (45%), Gaps = 51/411 (12%)

Query: 5   KLTDKQVRGIK---KPGNHPDGGNLYLRVRENGSKSFIVKATIDKKQREWTIGSYGSEEH 61
           KL  +QV   K   KP    DGG LYL V  NGS+ + +K  +D K++   +G Y +   
Sbjct: 2   KLNARQVDTAKPKDKPYKLSDGGGLYLLVNPNGSRYWRLKYRVDGKEKLLALGVYPA--- 58

Query: 62  HFSLAEARKRRDEIMAVIRAGGISEPTGK---SVTQSVEPESTTFPAPLFGPFSIELIQQ 118
             SLA+AR +RDE    I AGGI     +    + +  + ++T     L   +    I++
Sbjct: 59  -ISLAQARGKRDEAKRGI-AGGIDPNVARREEKIAREAQIKNTFQDIAL--EWHASKIKK 114

Query: 119 IEGGFRNAKHRAQWRSTLETYCKSIW----EKRVDRITTDDVLAILRPIWSTKA-ETASR 173
              G+ +          +E + K ++     K + +I   ++L +LR + S  A E A +
Sbjct: 115 WSAGYAS--------DIMEAFNKDVFPYIGNKPIAQIKPLELLNVLRRMESRGATEKAKK 166

Query: 174 VRGRIERVLNAAKVRGFRSGENPA-----AWQGHLQLLLPKRQKLQRGHHPALPFQDLPT 228
           VR R   V   A V G R+  NPA     A QGH           +  H+P L  Q+LP 
Sbjct: 167 VRQRCGEVFRYAIVTG-RAEYNPAPDLTSAMQGH-----------ESSHYPFLNAQELPE 214

Query: 229 LWQKLTSI--DTIASAALQFLILTAARSGELRGAKWEEFDLEKRLWTIPASRMKAAREHL 286
            +  L+      +   A + LILT  R+GELR A W+E D E   W IPA RMK  R H 
Sbjct: 215 FFHALSEYTGSKLVLLAARLLILTGVRTGELRAANWQEIDTENARWEIPAERMKMRRPHC 274

Query: 287 VPLSDSCIEILKRMQKIR-HSDFVFPGTRE-HAPLSDMTLSKVLH--GLCKGYTVHGFRS 342
           VPLS   I IL  ++++      VFPG  +    +S+ ++++V    G     T HGFR 
Sbjct: 275 VPLSRQAIAILDEIREMTGRYPLVFPGRNDPRNTMSEASINQVFKRIGYAGRVTGHGFRH 334

Query: 343 TFRDWCGEKTDFSREHAEACLAHTIGSAVERAYRRGNSLEPRRRIMTAWEA 393
           T      E+  ++    E  LAH   +A+   Y     L+ RR  M  W A
Sbjct: 335 TMSTILHEQ-GYNTAWIETQLAHVDKNAIRGTYNHAQYLDGRRE-MLQWYA 383