Pairwise Alignments

Query, 409 a.a., integrase DNA protein from Sinorhizobium meliloti 1021

Subject, 419 a.a., integrase arm-type DNA-binding domain-containing protein from Dickeya dadantii 3937

 Score =  115 bits (288), Expect = 2e-30
 Identities = 115/422 (27%), Positives = 183/422 (43%), Gaps = 48/422 (11%)

Query: 6   LTDKQVRGIK---KPGNHPDGGNLYLRVRENGSKSFIVKATIDKKQREWTIGSYGSEEHH 62
           LTD +VR  K   K     D   LYL V  +G+K +  +     K+     G Y      
Sbjct: 2   LTDSKVRSAKPLAKSYKLTDSQGLYLTVSTSGAKLWYFRYRFGGKENRLAFGPYPQT--- 58

Query: 63  FSLAEARKRRDEIMAVIRAGGISEPTGKSVTQSVEPESTTFPAPLFGPFSIELIQQIEGG 122
            +LAEAR++RD    ++ A GIS    +        ES TF +      +  L    +  
Sbjct: 59  -TLAEAREKRDAARKLL-ASGISPSQLRKTNNPAVDESHTFQSVTMAWHTSSLKLWSDA- 115

Query: 123 FRNAKHRAQWRSTLETYC-KSIWEKRVDRITTDDVLAILRPIWSTKA-ETASRVRGRIER 180
                H  +    L+ Y   +I    + ++ T  +  +++ I      + A RVR  + +
Sbjct: 116 -----HADKILICLKRYVFPAIGAMDIAQVETRHLAQLVKSIDDKGVHDVAGRVRQHLTK 170

Query: 181 VLNAAKVRGFRSGENPAAWQGHLQLLLPKRQKLQRGHHPALPFQDLPTLWQKLTSID--T 238
           ++  A  +G           G +  +  +       HHPALP + LP L +K+ S     
Sbjct: 171 IMRHAVQQGVIKYNPAYDLDGVVTPVATQ-------HHPALPLKRLPELLEKIESYKGRM 223

Query: 239 IASAALQFLILTAARSGELRGAKWEEFDLEKRLWTIPASR------------MKAAREHL 286
           +   AL+  +    RS ELR A+W+EF+L+  +W++PA R             K   EHL
Sbjct: 224 LTRLALELNLHVFLRSSELRFARWDEFNLKAHIWSVPAQREAVNDVRFSERGAKMKDEHL 283

Query: 287 VPLSDSCIEILKRMQKIR-HSDFVFPGTRE-HAPLSDMTLSKVLHGLCKGYTV------H 338
           VPLS   + +LK++Q I   S FVFPG    + P+S+ T++K L  +  GY        H
Sbjct: 284 VPLSRQAVALLKQIQAISGKSVFVFPGAHTLNKPMSENTINKALRVI--GYDTKSEVCGH 341

Query: 339 GFRSTFRDWCGEKTDFSREHAEACLAHTIGSAVERAY-RRGNSLEPRRRIMTAWEAFILT 397
           GFR+       E   +S++  E  ++H   + V  AY  +   LE R  +M  W  ++  
Sbjct: 342 GFRTMACSALNESGRWSKDAIERQMSHKERNGVRAAYVHKAEHLEARIEMMQWWSDYLDV 401

Query: 398 GR 399
            R
Sbjct: 402 NR 403