Pairwise Alignments

Query, 409 a.a., integrase DNA protein from Sinorhizobium meliloti 1021

Subject, 420 a.a., integrase arm-type DNA-binding domain-containing protein from Dickeya dadantii 3937

 Score =  115 bits (289), Expect = 2e-30
 Identities = 121/426 (28%), Positives = 189/426 (44%), Gaps = 66/426 (15%)

Query: 5   KLTDKQVRGIK---KPGNHPDGGNLYLRVRENGSKSFIVK--ATIDKKQREWTIGSYGSE 59
           KL  +QV   K   K     DGG LYL +   GSK + +K     DKK+     G + + 
Sbjct: 2   KLNARQVETAKPKEKTYKMADGGGLYLEITPRGSKYWRMKYRRPDDKKEDRLAFGVWPT- 60

Query: 60  EHHFSLAEARKRRDEIMAVIRAGGISEPTGKSVTQSVEP--ESTTFPAPLFGPFSIELIQ 117
               +LA+AR +RDE               K + Q ++P  E     A   G ++ E I 
Sbjct: 61  ---VTLADARAKRDEAK-------------KLLVQGIDPKAEQKEAQAETAGAYTFETIA 104

Query: 118 QIEGGFRNAK----HRAQWRSTLETYC-KSIWEKRVDRITTDDVLAILRPI-WSTKAETA 171
           + +    N +    HRA+    LE Y    I    + ++ T  +LA ++ +  S K + A
Sbjct: 105 R-QWHASNKRWGDYHRARVMRYLELYIFPHIGTADIRKLKTSHLLAPIKAVDASGKHDVA 163

Query: 172 SRVRGRIERVLNAAKVRGFRSGENPAAWQGHLQLLLPKRQKLQRGHHPALPFQDLPTLWQ 231
            R++ R+  ++  A V+      NPA+           R      H+PALP + L     
Sbjct: 164 QRLQQRVTAIMRYA-VQNDYIDSNPASDMSGALTTTKAR------HYPALPPERLHEFLS 216

Query: 232 KLTSID--TIASAALQFLILTAARSGELRGAKWEEFDLEKRLWTIPASR----------- 278
           +L +     +   A++  +LT  RS ELR A+W EFD +K  W +PA R           
Sbjct: 217 RLAAYRGRQMTRIAVELTLLTFVRSSELRFAQWHEFDFDKAYWRVPAQREAIKGVRYSYR 276

Query: 279 -MKAAREHLVPLSDSCIEILKRMQKIR-HSDFVFPGTREHAP---LSDMTLSKVLHGLCK 333
            MK   EH+VPLS   + +L++++ I   +  +FPG  +H P   +S+ T++  L  +  
Sbjct: 277 GMKMKEEHIVPLSRQAVALLEQLKAISGDNKCLFPG--DHDPEKVMSENTVNNALRAM-- 332

Query: 334 GYTV------HGFRSTFRDWCGEKTDFSREHAEACLAHTIGSAVERAYRRGNSLEPRRRI 387
           GY        HGFR+  R   GE   +S +  E  L+H+  + V  AY   +     RR+
Sbjct: 333 GYDTQTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYTHTSEYLDERRL 392

Query: 388 MTAWEA 393
           M  W A
Sbjct: 393 MVQWWA 398