Pairwise Alignments

Query, 345 a.a., Novel Xylose regulator from LacI family (from data) from Sinorhizobium meliloti 1021

Subject, 353 a.a., LacI family DNA-binding transcriptional regulator from Rhizobium sp. OAE497

 Score =  153 bits (387), Expect = 6e-42
 Identities = 111/312 (35%), Positives = 157/312 (50%), Gaps = 9/312 (2%)

Query: 5   VHDIAAEAGVSLATVDRVLNNRPGVRSVTRGKVERAIATLGYVRDVAAANLA-KSRSYPL 63
           V DIA +AG+S ATVDRVLN R GVR  T  +V+ AIA L   +  A A +A +  +  +
Sbjct: 7   VKDIAFQAGLSTATVDRVLNGRTGVRRQTEQRVKAAIAELE--KQQAGAEVAGRKLAIDI 64

Query: 64  IFILPAGENSFMRG-LEAEVRSAMSRSATERLDITILSVPVFDAPALAAALHDARERRPA 122
           +   P   +  +R   EAEV + +      R     +  P      L   L   R R   
Sbjct: 65  VMETPVRFSDAVRAAFEAEVATLLPTVFRCRFHFAEVMKPA----ELVQLLDRIRLRGTH 120

Query: 123 GVAVVAVDAPEVTEAVKRLREDGIAVVTLVSDLPGSGRDHFAGVDNVAAGRTAGSLMGRF 182
           G+ + A D PEV  AV+R  + GI VVTLV+DLP S R  + G DN AAG TA  L+G  
Sbjct: 121 GIVLKAPDVPEVVAAVRRADDAGIPVVTLVTDLPNSPRVAYTGADNRAAGETAAYLIGSV 180

Query: 183 LGGGEGPVAVLAGSMLVRDHRDRLEGFQAVMSEDFAWRRILPVIEGQDNPSLVETLVGAL 242
            GG  G V V   S   R   +R  GF+ V+ E +    +  + EG    +   +L    
Sbjct: 181 FGGTPGHVLVTLSSGRFRGEEEREIGFRRVIREHYPAIGVTEISEGHGTDAATGSLAARA 240

Query: 243 LGQHPDLAGIYSLGAGNRGLVAALEKAGKGRAVCTIAHELTPHSRAGLLSGTIDALLNQN 302
           L     +  +YS+G GNR ++AA E A +   V  +AH+L   +R+ L SG I+ +L+ +
Sbjct: 241 LASDASIDAVYSIGGGNRAVLAAFEAASRKLRV-FVAHDLDADNRSLLASGKINFVLHHD 299

Query: 303 AGHEVRSAIRVL 314
              + RSA R +
Sbjct: 300 LRSDARSAFRAI 311



 Score = 25.8 bits (55), Expect = 0.002
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 8/57 (14%)

Query: 287 RAGLLSGTIDALLNQNAG------HEVRSAIRVLKAKADGLPVIAAQERIRIDIFLK 337
           +AGL + T+D +LN   G        V++AI  L+ +  G  V  A  ++ IDI ++
Sbjct: 13  QAGLSTATVDRVLNGRTGVRRQTEQRVKAAIAELEKQQAGAEV--AGRKLAIDIVME 67