Pairwise Alignments

Query, 345 a.a., Novel Xylose regulator from LacI family (from data) from Sinorhizobium meliloti 1021

Subject, 352 a.a., LacI family transcriptional regulator from Pseudomonas fluorescens SBW25

 Score =  143 bits (360), Expect = 8e-39
 Identities = 101/336 (30%), Positives = 160/336 (47%), Gaps = 10/336 (2%)

Query: 2   RPTVHDIAAEAGVSLATVDRVLNNRPGVRSVTRGKVERAIATLGYVRDVAAANLAKSR-- 59
           RPT+  +AA AG+S+ATVDRVLN R  V   T  +V +A   +GY          + R  
Sbjct: 6   RPTIATVAAHAGLSVATVDRVLNARAPVNPDTAEQVFQAAEAVGYFAARLIGQRIRERRP 65

Query: 60  SYPLIFILPAGENSFMRGLEAEVRSAMSRSATERLDITILSVPVFDAPALAAALHDARER 119
           +Y    +L     +F   L   + +A    AT  L      + V   P+   A  +    
Sbjct: 66  TYRFGILLLGTAQAFYANLAQSISTAAQHHATANLTCQFEYI-VDRTPSAIVAQIEQLAV 124

Query: 120 RPAGVAVVAVDAPEVTEAVKRLREDGIAVVTLVSDLPGSGRDHFAGVDNVAAGRTAGSLM 179
           +  G+AVV+   P +   +K++RE G+ VV L+SD+     + + G DN   GRT G L+
Sbjct: 125 QCDGLAVVSFAHPLINACLKQIREAGVPVVALLSDIHEQALEPYVGQDNHVVGRTMGWLL 184

Query: 180 GRFLGGGEGPVAVLAGSMLVRDHRDRLEGFQAVMSEDFAWRRILPVIEGQDNPSLVETLV 239
            R  G  +G V +L G      H+ R+EG  + ++E     + L  +   DN  + E   
Sbjct: 185 ARTGGARKGSVGILLGGHRFLGHQARVEGLHSYLAEHAPGLKPLEPLINLDNCDITEEAT 244

Query: 240 GALLGQHPDLAGIYSLGAGNRGLVAALEKAGKGRAVCTIAHELTPHSRAGLLSGTIDALL 299
             L+ +H DL G+  +G G  G+++AL +  K  A+C I  E T  SR  L  G ID ++
Sbjct: 245 LDLISRHSDLRGLCVVGGGGDGIISALAQLPKRPALCCILQESTELSRQALRQGLIDVVM 304

Query: 300 NQNAGHEVRSAIRVLKAKADGLPVIAAQERIRIDIF 335
           +   G    + +++L A       + ++ER R + F
Sbjct: 305 DSQPGQTATALVQLLVA-------LQSEERERTEGF 333