Pairwise Alignments

Query, 394 a.a., flagellin A from Sinorhizobium meliloti 1021

Subject, 687 a.a., flagellin, filament structural protein from Pseudomonas putida KT2440

 Score = 77.8 bits (190), Expect = 9e-19
 Identities = 88/376 (23%), Positives = 153/376 (40%), Gaps = 47/376 (12%)

Query: 3   SILTNNSAMAALSTLRSISSSMEDTQSRISSGLRVGSASDNAAYWSIATTMRSDNQALSA 62
           ++ TN ++M+    L   S ++  T  R+SSGL++ SA D+AA   I+  + +  + LS 
Sbjct: 4   TVNTNITSMSVQKNLNKSSDALGTTMGRLSSGLKINSAKDDAAGLQISNRLTTQIKGLSV 63

Query: 63  VQDALGLGAAKVDTAYSGMESA---IEVVKEIKAKLVAATEDGVDKAKIQEEITQLKDQL 119
                  G +   TA   M ++   ++ ++E+  +    +    D+A +Q+E T L  +L
Sbjct: 64  AVKNANDGISIAQTAEGAMATSGNIMQRMRELALQSANGSNSDDDRASMQQEFTALSGEL 123

Query: 120 TSIAEAASFSGENWLQADLSGG-----------------PVTKSVVGGFVRDSSGAVSVK 162
           T IA   +F G N L    SG                   V+ + + G   ++S A  V 
Sbjct: 124 TRIANTTTFGGRNLLDGTFSGSSFQVGANSNESISFGMKDVSATSMKGNYNEASVAGGVA 183

Query: 163 KVDYSLNTDTVLFDT------------TGNTGILDKVYNVSQASVTLPVNVNGTTSEYTV 210
            +  S+      F T            T   G+ DK   +  A+  L +NV  TT+  T+
Sbjct: 184 TLQASVTGAAGKFGTNNAGSTSASVVGTAGAGVFDKP-TIGAAAGNLVLNVGTTTT--TI 240

Query: 211 GAYNVDDLIDASATFDGDYANVGAGA---LAGDYVKVQGSWVKAVDVA-------ATGQE 260
            A   D L D     + + +N G  A    A   +K+ G+    +D +       A G  
Sbjct: 241 AAAAGDTLQDVVDNINLETSNTGVTASIDSATGALKLDGTQAFTIDASTDDVLSTALGLA 300

Query: 261 VVYDDGTTKWGVDTTVTGAPATNVAAPASIATIDITIAAQAGNLDALIAGVDEALTDMTS 320
                  +K G      G      A   ++ + +I + A    L +++  V+ A T  T 
Sbjct: 301 EAGGAQLSKTGTANLRDGVLGAGGAGNLTLGSTNIALVA-TDTLSSVVGKVN-AQTGTTG 358

Query: 321 AAASLGSISSRIDLQS 336
             AS+ S + ++ L S
Sbjct: 359 VTASIDSATGQLKLNS 374



 Score = 52.8 bits (125), Expect = 3e-11
 Identities = 80/361 (22%), Positives = 133/361 (36%), Gaps = 24/361 (6%)

Query: 52  TMRSDNQALSAVQDALGLGAAKVDTAYSGMESAIEVVKEIKAKLVAATEDGVDKAKIQEE 111
           T+ S N AL A  D L     KV+ A +G       +     +L   +  G D       
Sbjct: 329 TLGSTNIALVAT-DTLSSVVGKVN-AQTGTTGVTASIDSATGQLKLNSAAGFDVGGTAGT 386

Query: 112 ITQL---------KDQLTSIAEAASFSGENWLQADLSGGPVTKSVVGGFVRDSSGAVSVK 162
           +T L           Q T +A AAS    N    + + G    ++V     + +GAV   
Sbjct: 387 LTGLGLTAGSVAIAPQTTGLASAASID-INGTTFNFAQGDDLDAIVDNINNNGAGAVGSG 445

Query: 163 KVDYSL-----NTDTVLFDTTGNTGILDKVYNVSQASVTLPVNVN------GTTSEYTVG 211
                +     N   VL    G    LD    V+       V +N      G  ++ ++ 
Sbjct: 446 TALTGVTAKNDNGRLVLTSANGQDIKLDNGSGVTGQGALAAVGLNSGTTKAGLVADTSIS 505

Query: 212 AYNVDDLIDASATFDGDYANVGAGALAGDYVKVQGSWVKAVDVAATGQEVVYDDGTTKWG 271
              V+         D   A++ A +   +   V  +    + + A  Q++   DG+   G
Sbjct: 506 LNGVEVKFKKGDDMDSIAASINAASTGVNASVVVNAGSSTLSLFAD-QDITVADGSNGTG 564

Query: 272 VDTTVTGAPATNVAAPASIATIDITIAAQAGNLDALIAGVDEALTDMTSAAASLGSISSR 331
           +      A A   +A    +T+       A +    I  +D A+  + S  + LG++ +R
Sbjct: 565 LAALGLTAVAGKTSAVEMESTVSNLNITDAQSAQQAIQVLDGAMQSLDSQRSQLGAVQNR 624

Query: 332 IDLQSDFVNKLSDSIDSGVGRLVDADMNEESTRLKALQTQQQLAIQALSIANSDSQNVLS 391
            D     +  +S++  +   R+ DAD   E+  L   QT QQ +   LS AN    +VL 
Sbjct: 625 FDSTVANLQSISENSTAARSRIQDADFAAETAELSKQQTLQQASTAILSQANQLPSSVLK 684

Query: 392 L 392
           L
Sbjct: 685 L 685