Pairwise Alignments

Query, 326 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 343 a.a., Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components from Enterobacter asburiae PDN3

 Score =  194 bits (494), Expect = 2e-54
 Identities = 113/316 (35%), Positives = 175/316 (55%), Gaps = 4/316 (1%)

Query: 2   MARLLKNREILLVVAIAVLLALIALRFPAFVAPSNLARVYSDTSILVILALGQMAVILTR 61
           M  LLKNRE+   +AI  L A++    P++     L  +++ + IL++LA+G   V+LTR
Sbjct: 1   MKTLLKNRELSAFLAILALFAVLVALNPSYFCLQTLGMIFASSQILILLAIGASLVMLTR 60

Query: 62  CIDLSMAANLALCGMVAAMLNNAFPGLPIPLIIVAVMALGGFLGSINGTLVWKLNIPPIV 121
            ID+S+ + + L  +   +  N+  G  +P+ I+  +++G   G+ NG LV  L IP IV
Sbjct: 61  NIDVSVGSIVGLSAIAVGVALNS--GYSLPVSILFALSIGALAGTFNGFLVVGLRIPAIV 118

Query: 122 VTLGTLTIYRGLIFVLTNGKWINAHEMSDAFKALPRLDVAGMPVLSWLSLVIVALMFLVM 181
            TLGTL +YRG + + T GKWI    +    K+L      G+  L  L+L+I A     +
Sbjct: 119 ATLGTLGLYRGAMLLWTGGKWIEG--LPPGLKSLSEPAAVGISPLGMLALIIAATGAWTL 176

Query: 182 GRTPLGRAFYAVGGNPHAAVYTGIDVGRTRFFAYCLSGALAGLSGYLWVSRYAVAYVDIA 241
            RT  GR FYAVG N  AA   G+ V RTR  A+ L+G LA  +G ++ ++         
Sbjct: 177 SRTAFGRDFYAVGDNLAAARQLGVAVNRTRMIAFTLNGMLAACAGIVFAAQIGFVPNQTG 236

Query: 242 AGFELDIIAACVIGGISIAGGIGSVAGAVLGALFLGVIKNALPVINISPFAQLAISGTVI 301
           +G E+  IAACV+GGIS+ GG G++ GA+LGA FL  I   L +  +  +    I+G V+
Sbjct: 237 SGLEMKAIAACVLGGISLLGGTGTLVGALLGAFFLTQIDTVLVLFRLPAWWNDFIAGLVL 296

Query: 302 IIAVAVNARAERRKGR 317
           +  + ++ R  +   R
Sbjct: 297 LGVLVLDGRLRQALAR 312