Pairwise Alignments

Query, 326 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 342 a.a., autoinducer 2 ABC transporter permease LsrC from Escherichia coli ECRC98

 Score =  197 bits (501), Expect = 3e-55
 Identities = 113/310 (36%), Positives = 173/310 (55%), Gaps = 4/310 (1%)

Query: 1   MMARLLKNREILLVVAIAVLLALIALRFPAFVAPSNLARVYSDTSILVILALGQMAVILT 60
           M+  +  NREI  ++A+ +L  L       +++   L  VYS   IL++LA+G   V+LT
Sbjct: 1   MLKFIQNNREITALLAVLLLFVLPGFLDRQYLSVQTLTMVYSSAQILILLAMGATLVMLT 60

Query: 61  RCIDLSMAANLALCGMVAAMLNNAFPGLPIPLIIVAVMALGGFLGSINGTLVWKLNIPPI 120
           R ID+S+ +   +C ++  ML NA  G  +P+  VA + LG   G  NG LV  L IP I
Sbjct: 61  RNIDVSVGSITGMCAVLLGMLLNA--GYSLPVACVATLLLGLLAGFFNGVLVAWLKIPAI 118

Query: 121 VVTLGTLTIYRGLIFVLTNGKWINAHEMSDAFKALPRLDVAGMPVLSWLSLVIVALMFLV 180
           V TLGTL +YRG++ + T GKWI    +    K L    + G+  + WL++++VA M  +
Sbjct: 119 VATLGTLGLYRGIMLLWTGGKWIEG--LPAELKQLSAPLLLGVSAIGWLTIILVAFMAWL 176

Query: 181 MGRTPLGRAFYAVGGNPHAAVYTGIDVGRTRFFAYCLSGALAGLSGYLWVSRYAVAYVDI 240
           + +T  GR+FYA G N   A   G+     R  A+ L+G +A L+G ++ S+        
Sbjct: 177 LAKTAFGRSFYATGDNLQGARQLGVRTEAIRIVAFSLNGCMAALAGIVFASQIGFIPNQT 236

Query: 241 AAGFELDIIAACVIGGISIAGGIGSVAGAVLGALFLGVIKNALPVINISPFAQLAISGTV 300
             G E+  IAACV+GGIS+ GG G++ GAVLGA FL  I + L ++ I  +    I+G V
Sbjct: 237 GTGLEMKAIAACVLGGISLLGGSGAIIGAVLGAWFLTQIDSVLVLLRIPAWWNDFIAGLV 296

Query: 301 IIIAVAVNAR 310
           ++  +  + R
Sbjct: 297 LLAVLVFDGR 306