Pairwise Alignments

Query, 279 a.a., ABC transporter for N-Acetyl-D-glucosamine, permease protein 2 (from data) from Sinorhizobium meliloti 1021

Subject, 278 a.a., carbohydrate ABC transporter permease from Rhizobium sp. OAE497

 Score =  129 bits (325), Expect = 5e-35
 Identities = 88/283 (31%), Positives = 146/283 (51%), Gaps = 12/283 (4%)

Query: 2   SKARASFMRTGAVHAALIAYTLIALFPVFLTIVNSFKSRNAIFREPLAVPTPETFSLIGY 61
           SK+++  +R  A+HA L    +I LFP+++  + S      IF  P  V  P T  +  +
Sbjct: 3   SKSQSLLLRKIALHAVLTPLAIIWLFPLWMMFIFSTMPDYGIF-SPEIVLLPSTNFVANF 61

Query: 62  ETVLKQGDFIGYFQNSIIVTVVSIALVLLFGAMAAFALSEYRFRGNTLMGLYLALGIMIP 121
             +  Q  F      SI V V+   L +L  +MA +AL+ YRF G +++   +   I +P
Sbjct: 62  RDLEAQTGFTRAMFTSISVAVIYTVLSVLLTSMAGWALARYRFAGRSVVVAIILGTITLP 121

Query: 122 IRLGTVAILQGMVATG---LVNTLTALILVYTAQGLPLAVFILSEFMRTVSDDLKNAGRI 178
             +  V I Q ++      L NT  ALI+      L   V  + +    + ++L +A R+
Sbjct: 122 FAV--VVIPQFIMVAREFKLANTWVALIVPPLFNSL--GVLFMRQSFSMMPNELFDAARV 177

Query: 179 DGLSEYAIFLRLVLPLIRPAMATVAVFTMIPIWNDLWFPLIL--APAEATKTVTLGSQIF 236
           +G+ E+ IFLR+ LPL RP MA +A+   +  WN+  +PL++   PA  T  V LG+   
Sbjct: 178 EGVKEWQIFLRIALPLARPTMAALAIILFLVSWNNYLWPLLINSRPAMMTAPVALGT--L 235

Query: 237 IGQFVTNWNAVLSALSLAIFPVLVLYVIFSRQLIRGITAGAVK 279
           IG    +W  +++  ++   P+L+++V+  R  I GI AGA+K
Sbjct: 236 IGLTKVSWGGIMAGATMLTAPILIVFVLLQRHFIAGIAAGAIK 278