Pairwise Alignments

Query, 767 a.a., penicillin-binding protein from Sinorhizobium meliloti 1021

Subject, 772 a.a., penicillin-binding protein 1B from Pseudomonas sp. S08-1

 Score =  295 bits (756), Expect = 5e-84
 Identities = 196/550 (35%), Positives = 290/550 (52%), Gaps = 38/550 (6%)

Query: 155 VALEDMSPYIPQAVIAIEDRRFYSHFGVDPLGLARAMLTNVMSGRMVQGGSTLTQQLAKN 214
           + L+ + PY+ + ++A+EDR F++HFGV P G+ARA+  N  +G++ QGGSTLTQQL KN
Sbjct: 170 IKLDQVPPYLVETLVAVEDREFFNHFGVSPKGIARAVWINATAGQLRQGGSTLTQQLVKN 229

Query: 215 LFLSPERTLERKVQEVLLAFWLEQKYTKDQILAMYLNRVFFGSN----AYGVEAASRRYF 270
            +L+ ER+L RK+ E ++A  LE  Y K +IL  YLN VF G +     +G   AS+ +F
Sbjct: 230 FYLTSERSLTRKLTEAMMAVLLELHYDKKEILEAYLNEVFLGQDGQRAVHGFGLASQYFF 289

Query: 271 NKSARDVNLGEAALLAGLLKAPSRLSPARDPEAAEERAQLVLGAMREEGFISDSEIKTAM 330
           ++   ++ L + ALL G++K P+  +P R+PE A +R  LVL  + E+G ++ +E+  A 
Sbjct: 290 SQPLGELKLEQVALLVGMVKGPTVYNPRRNPELALKRRNLVLDLLAEQGVVT-AEVAEAA 348

Query: 331 SQAP---TRAKSFWSGAEHYVADMVMDQVPGMIGE---VTQDLVIDTTIDLTLEKKAEEV 384
            Q P   T+  S    +     D+V  Q+     E     + L I T+ D  L+ KAE  
Sbjct: 349 KQKPLGVTKRGSLADSSFPGFLDLVKRQLREDYREEDLTEEGLRIFTSFDPILQLKAESA 408

Query: 385 LAERLETEGGKLNASQ---AALVSIDGTGAIRALVGGRDYAESQFDRASKAKRQPGSAFK 441
           L E L+   G+    +   A +V+   TG I+AL+G R    + F+R   A R  GS  K
Sbjct: 409 LGETLKRLSGRKGVDEVEAAMVVTNPETGEIQALIGSRQPRFAGFNRVLDANRPIGSLIK 468

Query: 442 PFVYAAALE----------IGRTPMSVR-NDAPVRIGNWTPENYDQKYRGEVTLADALAN 490
           P VY  ALE          +  TP SV+  D  V    W P+NYD K  G + L   LAN
Sbjct: 469 PAVYLTALERPSQYTLTSWLEDTPFSVKGQDGQV----WRPKNYDGKAHGSIYLYQGLAN 524

Query: 491 SLNTIAAQLVMEVGPQNVVKLAHRLGIDSDMQANASIALGTSEVTLVELTSSYAPFMNGG 550
           S N   A+L +E+G  NV+K   RLG+  +  A  S+ LG   ++ +E+ + Y    NGG
Sbjct: 525 SYNLSTAKLGLELGVPNVLKTLERLGVQREWPAYPSMLLGAGALSPMEVATMYQTLANGG 584

Query: 551 FKATPHVIRRISTADGTVLYENTYDNPPRVLDPAIVSEMNRMMVRVLTDGTGKN--ARLP 608
           F      IR +  A+G  L    +    R  DP  +  +   M RV+ +GTG++  ++LP
Sbjct: 585 FNTPLRGIRSVLAAEGEPLKRYPFQIQQR-FDPGAIYLVQNAMQRVMREGTGRSVYSQLP 643

Query: 609 -GWEAAGKTGTTQSFRDALFVGYTSNLATGIWFGNDDGKFMKKVTGGGLPARAWHDFMVA 667
                AGKTGT+   RD+ F G++ +L   +W G DD      +TG     + W  FM  
Sbjct: 644 ASLNLAGKTGTSNDSRDSWFAGFSQDLLAVVWMGRDDNG-TTPLTGATGALQVWTGFMKK 702

Query: 668 AHEGLSPSPL 677
           A     P PL
Sbjct: 703 A----DPLPL 708