Pairwise Alignments

Query, 269 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 609 a.a., signal peptide protein from Sinorhizobium meliloti 1021

 Score = 44.7 bits (104), Expect = 5e-09
 Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 12/173 (6%)

Query: 71  ERNPKDREAGLNYANLLRMTGRNEQALAVMQQVAIYHPADREVLGAYGKAQAAA------ 124
           E +P  R + L     L   G+ ++A   ++ +    P +     AYG   + A      
Sbjct: 349 ESSPMRRLSELQLGLSLAGIGKVDEAKKHLKGLIDVDPKNIRNYLAYGSVLSDAKNYKEM 408

Query: 125 GQL-EQALATISRAQTPDRPDWKLKSAEGAILDQLGRSAEARLRYREALDLKPNEPSVLS 183
           G+L ++A+A I     P R DW +    G   ++     +A   +R+AL+L P++P VL+
Sbjct: 409 GELYDRAVAAIG--PVPKRSDWTVFFQRGIAYERQKLWEKAEPNFRKALELNPDQPQVLN 466

Query: 184 NLGMSYL-LTKDLRTA-ETYLKSAASQPDAGSSVRQNLALAVGLQGRFQEAET 234
            LG S++ +  +L    E   K+   +PD G  V  +L  A     RF EA T
Sbjct: 467 YLGYSWVDMNINLEDGLEMIRKAVELKPDDGYIV-DSLGWAYFRMNRFDEAVT 518



 Score = 39.3 bits (90), Expect = 2e-07
 Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 3/116 (2%)

Query: 68  QAYERNPKDREAGLNYANL--LRMTGRNEQALAVMQQVAIYHPADREVLGAYGKAQAAAG 125
           +A E NP D+   LNY     + M    E  L ++++     P D  ++ + G A     
Sbjct: 453 KALELNP-DQPQVLNYLGYSWVDMNINLEDGLEMIRKAVELKPDDGYIVDSLGWAYFRMN 511

Query: 126 QLEQALATISRAQTPDRPDWKLKSAEGAILDQLGRSAEARLRYREALDLKPNEPSV 181
           + ++A+  + RA      D  +    G    ++GR  EA  ++ +AL+LKP E  +
Sbjct: 512 RFDEAVTELERAAELMAGDATINDHLGDAYWRVGRKLEAVFQWNQALELKPEEAEI 567



 Score = 34.7 bits (78), Expect = 5e-06
 Identities = 23/86 (26%), Positives = 42/86 (48%)

Query: 169 REALDLKPNEPSVLSNLGMSYLLTKDLRTAETYLKSAASQPDAGSSVRQNLALAVGLQGR 228
           R+A++LKP++  ++ +LG +Y        A T L+ AA      +++  +L  A    GR
Sbjct: 487 RKAVELKPDDGYIVDSLGWAYFRMNRFDEAVTELERAAELMAGDATINDHLGDAYWRVGR 546

Query: 229 FQEAETIAGQELTSEQAEANVAYLRS 254
             EA     Q L  +  EA +  +++
Sbjct: 547 KLEAVFQWNQALELKPEEAEIPKIKA 572



 Score = 25.8 bits (55), Expect = 0.002
 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 193 KDLRTAETYLKSAASQPDAGSSVRQNLALAVGLQGRFQEAETIAGQELTSEQA 245
           +D   A    ++A       + V+Q L + + + G+F E   IA +EL S+ A
Sbjct: 63  RDFAAATELYRTALRFEPGNNDVKQRLMITLLMSGKFDEGAKIA-EELKSDPA 114