Pairwise Alignments

Query, 269 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 583 a.a., TPR repeat from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 67.4 bits (163), Expect = 7e-16
 Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 8/170 (4%)

Query: 56  ATELAAAAERIGQAYERNPKDREAGLNYANLLRMTGRNEQALAVMQQVAIYHPADREVLG 115
           A +L  AA   G+A + +P++ +A  N A  L+  GR+ +ALA  +Q     P D ++  
Sbjct: 54  AGQLERAAGYFGRAVQSSPQNADALNNLAYTLQQLGRDAEALAAYEQAQALLPDDADIAI 113

Query: 116 AYGKAQAAAGQLEQALATISRAQTPDRPDWKLKSAEGAILDQLGRSAEARLRYREALDLK 175
             G       QL +ALA    A         L   +G +L +LGR  EA   Y  AL  +
Sbjct: 114 NLGLLHKKLRQLPEALACFEHALQAHPAHVALLCNQGNVLQRLGRQQEALSSYERALTAE 173

Query: 176 PNEPSVLSNLGMSY--------LLTKDLRTAETYLKSAASQPDAGSSVRQ 217
           P+ P VL NL  +          L +  R ++ + K A +  + G++++Q
Sbjct: 174 PDNPVVLCNLSNALNELARYDEALARAERASQAHPKHAQAWVERGNALKQ 223



 Score = 52.0 bits (123), Expect = 3e-11
 Identities = 44/153 (28%), Positives = 68/153 (44%)

Query: 91  GRNEQALAVMQQVAIYHPADREVLGAYGKAQAAAGQLEQALATISRAQTPDRPDWKLKSA 150
           G  + A ++ + V    PA+  VL   G  ++ AGQLE+A     RA      +    + 
Sbjct: 21  GLLDAARSLYEGVLRQFPAEFAVLYHLGLLESQAGQLERAAGYFGRAVQSSPQNADALNN 80

Query: 151 EGAILDQLGRSAEARLRYREALDLKPNEPSVLSNLGMSYLLTKDLRTAETYLKSAASQPD 210
               L QLGR AEA   Y +A  L P++  +  NLG+ +   + L  A    + A     
Sbjct: 81  LAYTLQQLGRDAEALAAYEQAQALLPDDADIAINLGLLHKKLRQLPEALACFEHALQAHP 140

Query: 211 AGSSVRQNLALAVGLQGRFQEAETIAGQELTSE 243
           A  ++  N    +   GR QEA +   + LT+E
Sbjct: 141 AHVALLCNQGNVLQRLGRQQEALSSYERALTAE 173



 Score = 40.8 bits (94), Expect = 7e-08
 Identities = 39/161 (24%), Positives = 62/161 (38%), Gaps = 9/161 (5%)

Query: 58  ELAAAAERIGQAYERNPKDREAGLNYANLLRMTGRNEQALAVMQQVAIYHPADREVLGAY 117
           +L  A      A + +P       N  N+L+  GR ++AL+  ++     P +  VL   
Sbjct: 124 QLPEALACFEHALQAHPAHVALLCNQGNVLQRLGRQQEALSSYERALTAEPDNPVVLCNL 183

Query: 118 GKAQAAAGQLEQALATISRAQTPDRPDWKLKSAEGAILDQLGRSAEARLRYREALDLKPN 177
             A     + ++ALA   RA        +     G  L QLGR  EA     +A+ L P 
Sbjct: 184 SNALNELARYDEALARAERASQAHPKHAQAWVERGNALKQLGRIPEAVASCEKAIALDPA 243

Query: 178 EPSVLSNLGMSYL---------LTKDLRTAETYLKSAASQP 209
                +NL  + L         +    ++ E YL+S    P
Sbjct: 244 MVQAHTNLAATVLSDSVDTPRVIAAGRKSLEVYLQSVYRAP 284



 Score = 30.4 bits (67), Expect = 9e-05
 Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 9/94 (9%)

Query: 44  IPKLTRPVQSMNATELAAAAERIGQAYERNPKDREAGLNYANLLRMTGRNEQALAVMQQV 103
           + +L R  +++++ E A  AE         P +     N +N L    R ++ALA  ++ 
Sbjct: 153 LQRLGRQQEALSSYERALTAE---------PDNPVVLCNLSNALNELARYDEALARAERA 203

Query: 104 AIYHPADREVLGAYGKAQAAAGQLEQALATISRA 137
           +  HP   +     G A    G++ +A+A+  +A
Sbjct: 204 SQAHPKHAQAWVERGNALKQLGRIPEAVASCEKA 237