Pairwise Alignments

Query, 269 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 758 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1

 Score = 53.1 bits (126), Expect = 2e-11
 Identities = 49/189 (25%), Positives = 79/189 (41%), Gaps = 10/189 (5%)

Query: 47  LTRPVQSMNATELAAAAERIGQAYERNPKDREAGLNY----ANLLRMTGRNEQALAVMQQ 102
           L R +++M   +L+A      + Y R      AG+ +    AN L    R  +A+A+ Q 
Sbjct: 274 LARQLRAMGRRDLSA------ETYLRLAGIEGAGVAHLFDAANALNEMSRLPEAVALYQA 327

Query: 103 VAIYHPADREVLGAYGKAQAAAGQLEQALATISRAQTPDRPDWKLKSAEGAILDQLGRSA 162
           +        EV    G A    G+L++A      A+     D  + S   A+L  LGR A
Sbjct: 328 LLAREHDHSEVWNNLGNALRELGELDRAAECYETAERLSPDDPVVMSNRAALLGSLGRVA 387

Query: 163 EARLRYREALDLKPNEPSVLSNLGMSYLLTKDLRTAETYLKSAASQPDAGSSVRQNLALA 222
           EA +  R+ + L+P     LSNLG +      +  A     +A +       +R + A+ 
Sbjct: 388 EAEILCRKVVALQPGIGIPLSNLGQALYAQGRMEEAREQFDAAGAADSTNDDIRFHRAIV 447

Query: 223 VGLQGRFQE 231
             + G F E
Sbjct: 448 RLMLGDFAE 456



 Score = 47.0 bits (110), Expect = 1e-09
 Identities = 45/172 (26%), Positives = 77/172 (44%), Gaps = 2/172 (1%)

Query: 62  AAERIGQAYERNPKDREAGLNYANLLRMTGRNEQALAVMQQVAIYHPADREVLGAYGKAQ 121
           A   IG+A   N +  +  +N  N L  + R  +A A  ++    +    E L   G   
Sbjct: 83  AIHLIGEAIRANDRVPDYHVNLGNALFSSRRLPEAEAAYRRALTLNTDIPEALFGLGNTL 142

Query: 122 AAAGQLEQALATISRAQTPDRPDWKLKSAEGA-ILDQLGRSAEARLRYREALDLKPNEPS 180
           A  G+LE++L    ++    RP++    A  A +L +LGR AEA  + R A+  +P E S
Sbjct: 143 AQTGRLEESLE-FHQSALALRPNFVEALANMAGVLSRLGRPAEAVEKLRRAVAERPGEAS 201

Query: 181 VLSNLGMSYLLTKDLRTAETYLKSAASQPDAGSSVRQNLALAVGLQGRFQEA 232
           + ++LG + L +     A+  +  A         +    A  +  +GR +EA
Sbjct: 202 LQADLGRALLASGHRIEADVAVCRALRLAPDSPPILVAAADVIRARGRMEEA 253



 Score = 43.5 bits (101), Expect = 1e-08
 Identities = 44/165 (26%), Positives = 69/165 (41%), Gaps = 4/165 (2%)

Query: 87  LRMTGRNEQALAVMQQVAIYHPADREVLGAYGKAQAAAGQLEQALATISRA-QTPDR-PD 144
           L   GR  +A+ + Q++ + +P D       G A +  GQ + A+  I  A +  DR PD
Sbjct: 40  LHQAGRLLEAVEIYQRILVANPYDEGANHLLGVACSQMGQFDLAIHLIGEAIRANDRVPD 99

Query: 145 WKLKSAEGAILDQLGRSAEARLRYREALDLKPNEPSVLSNLGMSYLLTKDLRTAETYLKS 204
           + +    G  L    R  EA   YR AL L  + P  L  LG +   T  L  +  + +S
Sbjct: 100 YHVNL--GNALFSSRRLPEAEAAYRRALTLNTDIPEALFGLGNTLAQTGRLEESLEFHQS 157

Query: 205 AASQPDAGSSVRQNLALAVGLQGRFQEAETIAGQELTSEQAEANV 249
           A +          N+A  +   GR  EA     + +     EA++
Sbjct: 158 ALALRPNFVEALANMAGVLSRLGRPAEAVEKLRRAVAERPGEASL 202