Pairwise Alignments

Query, 501 a.a., D-arabinoate dehydratase (EC 4.2.1.5); also involved in L-fucose catabolism (from data) from Sinorhizobium meliloti 1021

Subject, 517 a.a., galactarate dehydratase from Pseudomonas fluorescens SBW25

 Score =  297 bits (761), Expect = 5e-85
 Identities = 183/489 (37%), Positives = 258/489 (52%), Gaps = 14/489 (2%)

Query: 3   APSSILLSPDDNVVVAT--AAIAPGDRLAGGVSAVARIEPGHKAAIRRIDVGEPVVKYGQ 60
           +P SI L   DNVV+      +  G     G+  V  I   HK  +  I  G  +++YGQ
Sbjct: 9   SPRSIRLHERDNVVIVVNDQGVPAGTEFPDGLVTVDFIPQSHKVTLEDIPEGGQIIRYGQ 68

Query: 61  AIGRATSPIAPGEHVHSHNLAFDQG----RLAVGAAVPPEAASEADKARTFLGYRRADGR 116
            IG A +PI  G  V    L          L +   VP   A    +  TF GYR ADG 
Sbjct: 69  TIGYALAPIPRGSWVQEDQLRMPTAPPLDSLPLSTEVPETQAPL--EGFTFEGYRNADGT 126

Query: 117 AATRNYIGIVASVNCSTTVCRAIADEANRRILPKYEGIDGFVPIVHDQGCGMSSTGDGMK 176
             TRN +GI  +V C T V           +LPKY  +D  V + H  GCG++ T     
Sbjct: 127 VGTRNILGITTTVQCVTGVLDHAVKRIKDELLPKYPHVDDVVALTHSYGCGVAITATDAY 186

Query: 177 NLHRTLAGYARHANFGG-VLMVGLGCE---VNQLTLYGQSGAG-AEKRHFNIQEAG-GSR 230
              RT+   AR+ N GG  L++ LGCE     Q+     S    +E   + +Q++  G  
Sbjct: 187 IPIRTVRNLARNPNLGGEALVISLGCEKLQAGQVMHDNDSSVDLSEPWLYRLQDSSHGFT 246

Query: 231 RSVERALGILDEIAKEVAAARRVPIPVSEIIVGLQCGGSDGLSGITANPALGAAVDILAA 290
             +E+ + + +   K++   RR  +P SE+I+G+QCGGSD  SGITANPALG A D+L  
Sbjct: 247 EMIEQIMALAEVRLKKLDQRRRETVPASELILGMQCGGSDAFSGITANPALGYASDLLLR 306

Query: 291 AGGTAILSETSEIYGAEHLLRSRAVNETVAVKLDGLIAWWEDYVAMHGASLDNNPSPGNK 350
           AG T + SE +E+  A +LL SRA  + VA +L   + W++ Y+A   A    N +PGNK
Sbjct: 307 AGATVMFSEVTEVRDAIYLLTSRAETKEVAEELVREMDWYDRYLAKGEADRSANTTPGNK 366

Query: 351 RGGLTTILEKSLGAVAKGGRSPLTAVYNYAERVTEPGLVFMDTPGYDPVSATGQVAGGAN 410
           +GGL+ I+EKSLG++ K G S +  V    ER    GL+F  TP  D V  T Q+A G N
Sbjct: 367 KGGLSNIVEKSLGSIVKSGSSAINGVLGPGERFKGKGLIFCATPASDFVCGTLQLAAGMN 426

Query: 411 VIAFTTGRGSCFGCRPAPSIKLTSNTALYRAMEEDMDIDCGVIASGETTIADLGRGIFEL 470
           +  FTTGRG+ +G   AP +K+++ T L +   + +DID G IA+G  TI +LG  +F  
Sbjct: 427 LHVFTTGRGTPYGLAMAPVVKVSTRTELAQRWPDLIDIDAGRIATGRATIEELGWELFHF 486

Query: 471 IIETASGRK 479
            ++ ASG+K
Sbjct: 487 YLDVASGKK 495