Pairwise Alignments

Query, 440 a.a., toxin secretion transmembrane protein from Sinorhizobium meliloti 1021

Subject, 432 a.a., Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC from Variovorax sp. SCN45

 Score =  133 bits (334), Expect = 1e-35
 Identities = 116/429 (27%), Positives = 193/429 (44%), Gaps = 63/429 (14%)

Query: 9   PVSPTVRLTTWVLISGLVAIFVGGYWLKIEIVARGQGKVIPVSRVQLVQPQTNGRIIRIL 68
           P  P   L  W++   L+A+    +  K++ V+ G GKV+P SR Q++Q    G ++ + 
Sbjct: 55  PPLPRASLLVWIIAGLLLALLAWAWSFKLDEVSTGSGKVVPSSREQMIQSLEGGILVDLK 114

Query: 69  VTEGQPVKAGDLLVGMDTVSVESQIKLRLTEVRRQRRGATVARVIIAALTNVAVANDDVL 128
           V EG  V  G++L  +D    ES ++   + VR             AAL   A    +V 
Sbjct: 115 VREGDIVDEGEVLAQLDRTKTESTVQESASRVR-------------AALAMSARLTAEVG 161

Query: 129 AAGRAAFERERHDLEVIDGAEALIEAVLTSLRDQVARINAQLDRVEQSRITQQARLQKAR 188
               A       D +++    AL +    S R+Q+A   + L  V Q+            
Sbjct: 162 GTPLAFPPEVSSDADLVRTETALYQ----SRREQLA---SSLSGVTQA------------ 202

Query: 189 SDLDISSRKFLSAGKLKDKGAISEVDYFERLREQRARELEVLISESELNILAAEANALAR 248
             L +  R+      L  +GA S+V+   RL+ Q        I+E+E    AA+  +   
Sbjct: 203 --LSLMRRELALTEPLVARGAASDVEVL-RLKRQ--------INEAETK--AADLKS--- 246

Query: 249 QRQSIISTAVENYQKQLNEASTSLAGLEAELSAARNQ---LALLAIRAPADGKVENLTVF 305
                     + Y K   + + + A +EA+ S  R +   L  L   +P  G V+++ V 
Sbjct: 247 ----------QYYVKAREDLAKANAEIEAQRSVTRGRSDSLTRLTFASPVRGIVKDIAVT 296

Query: 306 TIGGFVEAGSTLMSIVPSGDGMEIEAFFDNRDIGFLAKGQEAFVKFDAFPAERFGIVRGR 365
           T+GG +  G  LM IVP  + + +EA    RD+ F+  GQEA VK  A+    FG + G+
Sbjct: 297 TVGGVLPPGGKLMVIVPLDEKLLVEARISPRDVAFIHPGQEAAVKVTAYDYAIFGDLPGK 356

Query: 366 VTRVGADA-RGDIVPGKWVYAIHLVLDQETI-GIGGRDIGFSPGMTATIDVITGERRLIS 423
           VT +  D  + D+    + Y +++  D + +    G+     PGM AT+D+ TG + ++ 
Sbjct: 357 VTTISPDTIQDDVKRDVYYYRVYIRTDVDHLKNKNGQSFPIVPGMIATVDIRTGSKSVLD 416

Query: 424 YFFEPIIKA 432
           Y  +P+ KA
Sbjct: 417 YLLKPLNKA 425