Pairwise Alignments

Query, 301 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 306 a.a., predicted inner membrane protein (NCBI) from Escherichia coli BW25113

 Score =  119 bits (298), Expect = 9e-32
 Identities = 85/294 (28%), Positives = 142/294 (48%), Gaps = 14/294 (4%)

Query: 13  LVALATLWGASYTFIKIGVETIPPVTLIAARTLIAGTVLLALIAWRGLTLPRDGAMWRRF 72
           L AL  +WG++Y  I+IGVE+ PP+ +   R L AG +LLA +  RG  LP    +    
Sbjct: 13  LFALYIIWGSTYFVIRIGVESWPPLMMAGVRFLAAGILLLAFLLLRGHKLPPLRPLLNAA 72

Query: 73  LFQACLNSVVPFTLIAWSERTTDAGVAAILNSTTPIFAFLLTALITRHEPVTARK--FLG 130
           L    L +V    +     +   +G+AA++ +T P+F    + L      +  RK  ++G
Sbjct: 73  LIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRLFG----IKTRKLEWVG 128

Query: 131 VLAGIAGIGLIIGLEAFRGIGDQLIPQLAVVLATVCYAGAAIFGKGFRGLDPMMPACGSL 190
           +  G+AGI   I L +   +       + +++ ++ +A  +++G        MM     +
Sbjct: 129 IAIGLAGI---IMLNSGGNLSGNPWGAILILIGSISWAFGSVYGSRITLPVGMMAGAIEM 185

Query: 191 LAGAALLIPASLVVDRPWTLDPSPESLIALLCLSVFSTALAFVIYFRLIHTLGSVGATAQ 250
           LA   +L+ AS++     T  PS    +A+  L++F + +A   Y  LI  +    AT+ 
Sbjct: 186 LAAGVVLMIASMIAGEKLTALPSLSGFLAVGYLALFGSIIAINAYMYLIRNVSPALATSY 245

Query: 251 AYVRVPIGVAIGVVFLGETLSTTAWLGLGCVIAGVAAMTM-----PTRPRVATV 299
           AYV   + V +G    GETLS   WL LG ++  V  +T+     P +P VA V
Sbjct: 246 AYVNPVVAVLLGTGLGGETLSKIEWLALGVIVFAVVLVTLGKYLFPAKPVVAPV 299