Pairwise Alignments

Query, 512 a.a., lipoprotein from Sinorhizobium meliloti 1021

Subject, 315 a.a., peptidoglycan DD-metalloendopeptidase family protein from Paraburkholderia sabiae LMG 24235

 Score =  112 bits (279), Expect = 2e-29
 Identities = 73/244 (29%), Positives = 114/244 (46%), Gaps = 17/244 (6%)

Query: 280 GAYTVKPGDSLNRIAKANGVSVAALKQANGLST-EAIRIGQKLNI-PSASAKTPATDAVV 337
           G Y VKPGD+L RIA  NG +   +   N L+    I + Q L + P  +   P    V 
Sbjct: 74  GYYRVKPGDTLYRIALENGQNYRDIAAWNNLTNPNQIEVDQLLRVAPPGANGAPLVPGVA 133

Query: 338 TASVSAKKNEAQAASTEQGKLTETKAPAAKE----------SVSEVAIRSDGNEDLPKST 387
           TA +     ++   +   G      A AA +          S +          D   + 
Sbjct: 134 TAPIGGGAVQSAPINGAPGTPASPSAGAANQPPLYGAAPGASGAPAVTPPPAASDTTAAN 193

Query: 388 GIGKYRWPVRGAVVAAYGANVDGNRNDGINISVPEGTPIKAAENGVVIYSGSSLKELGNA 447
           G   + WPVRG ++  +    D ++N G+NI    G  +KA+ +G V+Y+G+ L+  GN 
Sbjct: 194 GNVTFAWPVRGPLLNGF----DDSKNKGVNIGGSAGEAVKASADGRVVYAGNGLRGYGNL 249

Query: 448 VLVRHDDGTVTVYGNAAELKVQRGQKVQRGQTLASSGMTGRATRPQVHFEVRKNATPVNP 507
           ++++HD   +T Y +   L V+ G  V +GQ +A  G    + R  +HFEVR+   PV+P
Sbjct: 250 IIIKHDATYLTAYAHNRALMVKEGDAVTKGQKIAEMG-NSDSDRVMLHFEVRRQGKPVDP 308

Query: 508 ATYL 511
             YL
Sbjct: 309 MKYL 312



 Score = 34.3 bits (77), Expect = 7e-06
 Identities = 49/203 (24%), Positives = 78/203 (38%), Gaps = 27/203 (13%)

Query: 109 SVQRTSLDEP-SAASRQPQVQTASLESQAAALPKAEPL---AGAAKDMSGKGGWSASNAP 164
           ++QRTSL+ P S A R   V   S+ +  A      P+   +G    ++  G    + AP
Sbjct: 6   AMQRTSLNVPLSVAQRSVCVAMLSVLAACATRLDQAPVVDRSGNLGTVTQTGAAPGAQAP 65

Query: 165 TIM---------VRQGDTVTVLARRFGVPEKEILKANGLKSASQVEPGQRLVIPTFGTAG 215
             +         V+ GDT+  +A   G   ++I   N L + +Q+E  Q L +   G  G
Sbjct: 66  VPLGPPPPGYYRVKPGDTLYRIALENGQNYRDIAAWNNLTNPNQIEVDQLLRVAPPGANG 125

Query: 216 SAAKAAASGSIADVEGGKKRPSPLPTDQREVAILPGQSQSREKSESRSDVAAGKLNSAGE 275
             A      + A + GG  + +P+          PG   S     +      G       
Sbjct: 126 --APLVPGVATAPIGGGAVQSAPING-------APGTPASPSAGAANQPPLYG-----AA 171

Query: 276 GGGNGAYTVKPGDSLNRIAKANG 298
            G +GA  V P  + +    ANG
Sbjct: 172 PGASGAPAVTPPPAASDTTAANG 194