Pairwise Alignments

Query, 512 a.a., lipoprotein from Sinorhizobium meliloti 1021

Subject, 251 a.a., putative lipoprotein (VIMSS) from Escherichia coli BW25113

 Score =  120 bits (302), Expect = 4e-32
 Identities = 77/247 (31%), Positives = 121/247 (48%), Gaps = 32/247 (12%)

Query: 266 AAGKLNSAGEGGGNGAYTVKPGDSLNRIAKANGVSVAALKQANGLSTE-AIRIGQKLNIP 324
           +  K +  G   G+  YTVK GD+L RI++  G SV  L + NG+S    I +GQKL + 
Sbjct: 27  SGSKSSDTGTYSGS-VYTVKRGDTLYRISRTTGTSVKELARLNGISPPYTIEVGQKLKLG 85

Query: 325 SASAKTPATDAVVTASVSAKKNEAQAASTEQGKLTETKAPAAKESVSEVAIRSDGNEDLP 384
            A + +      +T   +AK     A+ T    + ++  P   +                
Sbjct: 86  GAKSSS------ITRKSTAKSTTKTASVTPSSAVPKSSWPPVGQRC-------------- 125

Query: 385 KSTGIGKYRWPVRGAVVAAYGANVDGNRNDGINISVPEGTPIKAAENGVVIYSGSSLKEL 444
                  + WP  G V+  Y     GN+  GI+IS P GTPI AA  G V+Y G+ L+  
Sbjct: 126 -------WLWPTTGKVIMPYSTADGGNK--GIDISAPRGTPIYAAGAGKVVYVGNQLRGY 176

Query: 445 GNAVLVRHDDGTVTVYGNAAELKVQRGQKVQRGQTLASSGMTGRATRPQVHFEVRKNATP 504
           GN ++++H +  +T Y +   + V  GQ V+ GQ +A+ G T  A+  ++HF++R  AT 
Sbjct: 177 GNLIMIKHSEDYITAYAHNDTMLVNNGQSVKAGQKIATMGSTDAAS-VRLHFQIRYRATA 235

Query: 505 VNPATYL 511
           ++P  YL
Sbjct: 236 IDPLRYL 242



 Score = 35.4 bits (80), Expect = 2e-06
 Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 2/81 (2%)

Query: 145 LAGAAKDMSGKGGWSASNAPTIMVRQGDTVTVLARRFGVPEKEILKANGLKSASQVEPGQ 204
           LAG +   S   G  + +  T  V++GDT+  ++R  G   KE+ + NG+     +E GQ
Sbjct: 23  LAGCSGSKSSDTGTYSGSVYT--VKRGDTLYRISRTTGTSVKELARLNGISPPYTIEVGQ 80

Query: 205 RLVIPTFGTAGSAAKAAASGS 225
           +L +    ++    K+ A  +
Sbjct: 81  KLKLGGAKSSSITRKSTAKST 101



 Score = 25.4 bits (54), Expect = 0.002
 Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 16/112 (14%)

Query: 13  VIRLCAAILLAGVATGCSSDASRFGG---LFSRSDDIMTGSIPQGSSTVPRGDVASGGAA 69
           V+ L   +LLAG +   SSD   + G      R D +   S   G+S      +   G +
Sbjct: 14  VMLLSVGLLLAGCSGSKSSDTGTYSGSVYTVKRGDTLYRISRTTGTSVKELARL--NGIS 71

Query: 70  PSYGNSAALGQSYPSGDGNGGYNTAAAPVSSARVASTPMSVQRTSLDEPSAA 121
           P Y  +  +GQ    G          A  SS    ST  S  +T+   PS+A
Sbjct: 72  PPY--TIEVGQKLKLG---------GAKSSSITRKSTAKSTTKTASVTPSSA 112