Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 577 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  397 bits (1019), Expect = e-115
 Identities = 234/549 (42%), Positives = 313/549 (57%), Gaps = 44/549 (8%)

Query: 22  QVVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTIKVADGSVSYKGRDVLKMKE 81
           Q V+ +   L  GE   +VGESG GK+    AL+ LL P   V  GS+ + GRD+L +  
Sbjct: 31  QAVRGLDLTLQRGETLALVGESGCGKSTTALALLRLLAPGA-VLRGSIQFDGRDILALSP 89

Query: 82  NELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKASAQERRSLILDMLKRVGI 141
            +LR +RG EI ++FQEPMTSLNP  TIG Q+EE L  H K SA   R   +++L  V I
Sbjct: 90  AQLREVRGREISMIFQEPMTSLNPVHTIGTQIEETLRRHEKLSALAARKRAIELLDLVRI 149

Query: 142 RDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPTTALDAVIQRDVMELMVELT 201
            +P   +  +PH  SGG RQR+M+A  +  KP LL+ADEPTTALD  IQ  ++EL+  L 
Sbjct: 150 PEPHQRIDDHPHNLSGGQRQRVMIAMAVACKPRLLVADEPTTALDVTIQAQILELLDGLR 209

Query: 202 RAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTEDLLKAPQHPYTKKLLSSLPFR 261
           R    A+LLI+HDL +VA++  R+ VM  G  VE+  T  L  AP H YT+ LL +    
Sbjct: 210 RELDMALLLITHDLGLVAQWADRVAVMYGGEKVEEASTSRLFAAPSHAYTRGLLGASLHA 269

Query: 262 GRPRQIDLTSVPMISARDIIVDYA-GRKSL-----------------------------F 291
           G         +P I  R   +D A G +S                               
Sbjct: 270 GSALHYVDARLPEIQTR---LDAATGERSFALHVPEPNSKVRALPVRTAAAEPLLSVQDL 326

Query: 292 RKNKPKR------ALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVTESEGRIQFQG 345
           R + PKR      A+ GVS DI  GE V LVG SG GK+TL RT+  LV  + GRI F G
Sbjct: 327 RTDYPKRGGGVLHAVDGVSFDIRAGETVGLVGESGCGKSTLSRTLLRLVNPASGRIVFDG 386

Query: 346 RPRTE----NWTDYRLNCQMVFQDPYSSLDPRMTIEALVEEALRPVPGLDGKAKRKRTLE 401
               +        +R   QMVFQDPY+SL+PR ++  ++E  L+     D   +R R   
Sbjct: 387 TDIAQLSEKALKPWRRRVQMVFQDPYASLNPRRSVFDIIESVLKVHGVADRAERRNRIAA 446

Query: 402 TLEEVGLGVDYAGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDL 461
            LE VGL  D   R+P+E SGGQRQR+ IARA+  RP  ++ DEPVSALDV+V+AQ+L+L
Sbjct: 447 ILERVGLPADAGRRFPNEFSGGQRQRIGIARALVLRPSLVVLDEPVSALDVSVQAQILNL 506

Query: 462 FSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLS 521
             +L++ +G S LFISHDL VV  +ADRV+VM  G+I+E G    I+D P+  YTR L++
Sbjct: 507 LVELKEDFGLSYLFISHDLSVVRYIADRVMVMSKGQIVETGSHRDIWDRPQHPYTRSLIA 566

Query: 522 AIPALDQNE 530
           A+P  +Q +
Sbjct: 567 AVPGAEQRK 575



 Score =  185 bits (469), Expect = 5e-51
 Identities = 105/259 (40%), Positives = 156/259 (60%), Gaps = 10/259 (3%)

Query: 4   DKLLTVCGLSLEVARTGQQV---VKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPP 60
           + LL+V  L  +  + G  V   V  VSFD+  GE  G+VGESG GK+  +R L+ L+ P
Sbjct: 318 EPLLSVQDLRTDYPKRGGGVLHAVDGVSFDIRAGETVGLVGESGCGKSTLSRTLLRLVNP 377

Query: 61  TIKVADGSVSYKGRDVLKMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILH 120
               A G + + G D+ ++ E  L+  R   + +VFQ+P  SLNP  ++   +E  L +H
Sbjct: 378 ----ASGRIVFDGTDIAQLSEKALKPWR-RRVQMVFQDPYASLNPRRSVFDIIESVLKVH 432

Query: 121 TKASAQERRSLILDMLKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADE 180
             A   ERR+ I  +L+RVG+  P  A   +P+EFSGG RQRI +A  ++L+P+L++ DE
Sbjct: 433 GVADRAERRNRIAAILERVGL--PADAGRRFPNEFSGGQRQRIGIARALVLRPSLVVLDE 490

Query: 181 PTTALDAVIQRDVMELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTE 240
           P +ALD  +Q  ++ L+VEL    G + L ISHDL +V     R++VM KG IVE G   
Sbjct: 491 PVSALDVSVQAQILNLLVELKEDFGLSYLFISHDLSVVRYIADRVMVMSKGQIVETGSHR 550

Query: 241 DLLKAPQHPYTKKLLSSLP 259
           D+   PQHPYT+ L++++P
Sbjct: 551 DIWDRPQHPYTRSLIAAVP 569



 Score =  175 bits (443), Expect = 5e-48
 Identities = 107/267 (40%), Positives = 149/267 (55%), Gaps = 16/267 (5%)

Query: 266 QIDLTSVPMISARDIIVDYAGRKSLFRKNKPKRALHGVSIDIHEGEVVALVGGSGSGKTT 325
           Q+   + P++  R + V + G       N P +A+ G+ + +  GE +ALVG SG GK+T
Sbjct: 5   QVQAKAPPLLDVRGLDVFFLG------SNGPVQAVRGLDLTLQRGETLALVGESGCGKST 58

Query: 326 LGRTIAGLVTES---EGRIQFQGRP----RTENWTDYR-LNCQMVFQDPYSSLDPRMTIE 377
               +  L+       G IQF GR           + R     M+FQ+P +SL+P  TI 
Sbjct: 59  TALALLRLLAPGAVLRGSIQFDGRDILALSPAQLREVRGREISMIFQEPMTSLNPVHTIG 118

Query: 378 ALVEEALRPVPGLDGKAKRKRTLETLEEVGLGVDYA--GRYPHELSGGQRQRVAIARAIA 435
             +EE LR    L   A RKR +E L+ V +   +     +PH LSGGQRQRV IA A+A
Sbjct: 119 TQIEETLRRHEKLSALAARKRAIELLDLVRIPEPHQRIDDHPHNLSGGQRQRVMIAMAVA 178

Query: 436 RRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQD 495
            +PR L+ADEP +ALDVT++AQ+L+L   L++    + L I+HDLG+V Q ADRV VM  
Sbjct: 179 CKPRLLVADEPTTALDVTIQAQILELLDGLRRELDMALLLITHDLGLVAQWADRVAVMYG 238

Query: 496 GRIIEEGDRDTIFDSPKEAYTRRLLSA 522
           G  +EE     +F +P  AYTR LL A
Sbjct: 239 GEKVEEASTSRLFAAPSHAYTRGLLGA 265