Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 545 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  373 bits (957), Expect = e-107
 Identities = 218/532 (40%), Positives = 320/532 (60%), Gaps = 17/532 (3%)

Query: 6   LLTVCGLSLEVARTGQQ--VVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTIK 63
           +L V GL + +     +   +  +   +  G    IVGESGSGK++    ++ LL   + 
Sbjct: 10  ILEVRGLRVALPSDADRPHAIAQLDLRIEAGRTLCIVGESGSGKSVLATTVMGLLSKGLV 69

Query: 64  VADGSVSYKGRDVLK----MKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLIL 119
           +  G V   G  ++       +  LR LRG  +G+VFQEPMT+LNP +T G Q++E L  
Sbjct: 70  LEGGDVILSGEKLVDNGRFTSDKRLRQLRGTGMGMVFQEPMTALNPVLTCGEQVDELLRT 129

Query: 120 HTKASAQERRSLILDMLKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIAD 179
           HT   A ER++ IL + +RV + DP    +SYPH+ SGG RQRI++A  ++LKP LLI D
Sbjct: 130 HTAWGAAERKAHILSIFERVRLPDPARIHASYPHQLSGGQRQRIVIAMAIILKPRLLICD 189

Query: 180 EPTTALDAVIQRDVMELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRT 239
           EPTTALD   Q ++++L+ EL   +G+A+L I+HD+ +VA     ++VM +GA+VE+G  
Sbjct: 190 EPTTALDVTTQAEILKLIAELQAEQGSAVLFITHDMGVVAEIADDVMVMHRGALVEQGPC 249

Query: 240 EDLLKAPQHPYTKKLLSSLPFRGRPRQIDLT-SVPMISARDIIVDYAGRKSLFRKNKPKR 298
           + +L++P+  YT+ LL ++P    P   +L    P+++ + +   Y  R  L R  K   
Sbjct: 250 DQVLRSPREAYTRMLLDAVPGMTPPPARELPGGRPLLAGQGVGKIYTRRDWLGRA-KHNT 308

Query: 299 ALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVTESEGRIQFQGRPRTENWTDYRL- 357
           AL   S+ +H GE V +VG SGSGK+T  R +  L++ S G I + G     +  + RL 
Sbjct: 309 ALQDASVAVHRGETVGVVGESGSGKSTFARCMIRLISPSAGSILW-GDAEVRDLPEGRLR 367

Query: 358 ----NCQMVFQDPYSSLDPRMTI-EALVEEALRPVPGLDGKAKRKRTLETLEEVGLGVDY 412
                 Q+VFQDP  SL+PR T+  ++VE A+    GL     R+   E ++ + L    
Sbjct: 368 PLRSRVQVVFQDPNRSLNPRRTVGSSMVEGAMN--FGLSKLHARQTAEELMDRIQLPRTA 425

Query: 413 AGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFS 472
             RYPH+ SGGQRQR+AIARAIA +P+ L+ADE VSALDV+V+AQ+LDL  ++Q+  G  
Sbjct: 426 LDRYPHQFSGGQRQRLAIARAIACQPQVLVADEAVSALDVSVQAQILDLLREIQRDLGLG 485

Query: 473 CLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLSAIP 524
            LFI+HDL V  Q+ DRV+VM  GRI+E+G    +F +P   YTRRLL+A P
Sbjct: 486 ILFITHDLRVAAQLCDRVIVMSQGRIVEQGPTGQVFAAPANDYTRRLLAAAP 537



 Score =  167 bits (422), Expect = 1e-45
 Identities = 97/243 (39%), Positives = 140/243 (57%), Gaps = 15/243 (6%)

Query: 299 ALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVTES----EGRIQFQGRPRTENW-- 352
           A+  + + I  G  + +VG SGSGK+ L  T+ GL+++      G +   G    +N   
Sbjct: 29  AIAQLDLRIEAGRTLCIVGESGSGKSVLATTVMGLLSKGLVLEGGDVILSGEKLVDNGRF 88

Query: 353 -TDYRLN------CQMVFQDPYSSLDPRMTIEALVEEALRPVPGLDGKAKRKRTLETLEE 405
            +D RL         MVFQ+P ++L+P +T    V+E LR         ++   L   E 
Sbjct: 89  TSDKRLRQLRGTGMGMVFQEPMTALNPVLTCGEQVDELLRTHTAWGAAERKAHILSIFER 148

Query: 406 VGLG--VDYAGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFS 463
           V L         YPH+LSGGQRQR+ IA AI  +PR LI DEP +ALDVT +A++L L +
Sbjct: 149 VRLPDPARIHASYPHQLSGGQRQRIVIAMAIILKPRLLICDEPTTALDVTTQAEILKLIA 208

Query: 464 DLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLSAI 523
           +LQ   G + LFI+HD+GVV ++AD V+VM  G ++E+G  D +  SP+EAYTR LL A+
Sbjct: 209 ELQAEQGSAVLFITHDMGVVAEIADDVMVMHRGALVEQGPCDQVLRSPREAYTRMLLDAV 268

Query: 524 PAL 526
           P +
Sbjct: 269 PGM 271