Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 540 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  635 bits (1637), Expect = 0.0
 Identities = 328/524 (62%), Positives = 400/524 (76%), Gaps = 5/524 (0%)

Query: 6   LLTVCGLSLEVARTGQQVVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTIKVA 65
           LL V GL+L +A  G+ +V  +SFD+APGE+ GIVGESGSGKTLA R+LI L PP +   
Sbjct: 9   LLQVSGLTLALA-DGKALVHGISFDIAPGEMIGIVGESGSGKTLAARSLIGLAPPAVHRT 67

Query: 66  DGSVSYKGRDVLKMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKASA 125
            GS+ + G++V  +    LR LRG+ IG+VFQEPMTSLNPSM IGRQL+EGL LHT  S 
Sbjct: 68  AGSIVFDGQEVTALSAGALRKLRGSRIGMVFQEPMTSLNPSMAIGRQLDEGLALHTTLSP 127

Query: 126 QERRSLILDMLKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPTTAL 185
            +RR+ IL+ML+RV I+DP  ALS+YPH FSGGMRQRIMLAS MLL+P+LLIADEPTTAL
Sbjct: 128 AQRRARILEMLERVRIQDPAAALSAYPHRFSGGMRQRIMLASAMLLRPSLLIADEPTTAL 187

Query: 186 DAVIQRDVMELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTEDLLKA 245
           DAV+QR+VM+LMVELTR  GTA+L+ISHDLPMVARYT R+VVM  G IVE  RT  L+ A
Sbjct: 188 DAVVQREVMDLMVELTRDHGTAVLMISHDLPMVARYTDRMVVMHHGRIVESNRTAALVSA 247

Query: 246 PQHPYTKKLLSSLPFRGRPRQIDLTSVPMISARDIIVDYAGRKSLFRKNKPKRALHGVSI 305
           P+  YT+KLL+++P RG  R+I   + P++    +++D+     L  K  PKRAL G+ +
Sbjct: 248 PREDYTRKLLAAMPTRGPVREIP-QAAPILEVDGLVLDFPAGGGLLSKRPPKRALKGIDL 306

Query: 306 DIHEGEVVALVGGSGSGKTTLGRTIAGLVTESEGRIQFQGR---PRTENWTDYRLNCQMV 362
            I  GEVVALVGGSGSGKTTLGR IAGL+  S GRI F+G+    R+E W  YR  CQMV
Sbjct: 307 RIAPGEVVALVGGSGSGKTTLGRAIAGLLQPSGGRILFEGKGIARRSEGWARYRAQCQMV 366

Query: 363 FQDPYSSLDPRMTIEALVEEALRPVPGLDGKAKRKRTLETLEEVGLGVDYAGRYPHELSG 422
           FQDP SSLDPRMT+ A + EAL  +PGL   A+R R LE L+EV L  + A RYPHELSG
Sbjct: 367 FQDPASSLDPRMTVGASIGEALTGMPGLTPAARRGRILEVLQEVSLPAEVASRYPHELSG 426

Query: 423 GQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGV 482
           GQRQRVAIARA+ RRP F++ADEPVSALDVTVRAQ+L+LF+ LQ R+GFSCLFISHDL V
Sbjct: 427 GQRQRVAIARAVVRRPAFIVADEPVSALDVTVRAQILELFAQLQSRHGFSCLFISHDLAV 486

Query: 483 VEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLSAIPAL 526
           VEQ+ADRV+VM+ G I+E+G RD +FD P   YTR LL+A P +
Sbjct: 487 VEQIADRVIVMRHGEIVEQGPRDEVFDRPHHDYTRELLAAAPRM 530



 Score =  175 bits (443), Expect = 4e-48
 Identities = 91/245 (37%), Positives = 145/245 (59%), Gaps = 8/245 (3%)

Query: 18  RTGQQVVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTIKVADGSVSYKGRDVL 77
           R  ++ +K +   +APGE+  +VG SGSGKT   RA+  LL P+     G + ++G+ + 
Sbjct: 295 RPPKRALKGIDLRIAPGEVVALVGGSGSGKTTLGRAIAGLLQPS----GGRILFEGKGIA 350

Query: 78  KMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKASAQERRSLILDMLK 137
           +  E   R+   A+  +VFQ+P +SL+P MT+G  + E L      +   RR  IL++L+
Sbjct: 351 RRSEGWARYR--AQCQMVFQDPASSLDPRMTVGASIGEALTGMPGLTPAARRGRILEVLQ 408

Query: 138 RVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPTTALDAVIQRDVMELM 197
            V +  P    S YPHE SGG RQR+ +A  ++ +PA ++ADEP +ALD  ++  ++EL 
Sbjct: 409 EVSL--PAEVASRYPHELSGGQRQRVAIARAVVRRPAFIVADEPVSALDVTVRAQILELF 466

Query: 198 VELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTEDLLKAPQHPYTKKLLSS 257
            +L    G + L ISHDL +V +   R++VM  G IVE+G  +++   P H YT++LL++
Sbjct: 467 AQLQSRHGFSCLFISHDLAVVEQIADRVIVMRHGEIVEQGPRDEVFDRPHHDYTRELLAA 526

Query: 258 LPFRG 262
            P  G
Sbjct: 527 APRMG 531