Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 625 a.a., dipeptide ABC transporter ATP-binding protein from Variovorax sp. OAS795

 Score =  393 bits (1009), Expect = e-113
 Identities = 224/569 (39%), Positives = 344/569 (60%), Gaps = 42/569 (7%)

Query: 5   KLLTVCGLSLEVARTGQQV--VKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTI 62
           ++L V  L++  + + + V  VK++SF +  GE   +VGESGSGK++ + AL+ L+    
Sbjct: 12  RVLAVDDLNVRFSTSERTVDAVKNLSFHVDHGETLAVVGESGSGKSVTSLALMRLVEHGG 71

Query: 63  -KVADGSVSYKGR-----DVLKMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEG 116
            ++  G ++++ R     D+ + ++  +R +RGA+I ++FQEPMTSLNP  T G Q+ E 
Sbjct: 72  GRILGGRMAFRRRNGEVLDLAQARDTTMRGIRGADIAMIFQEPMTSLNPVFTAGDQIAEA 131

Query: 117 LILHTKASAQERRSLILDMLKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALL 176
           + +H        R+  L ML+ V I +    L  +PH+ SGGMRQR+M+A  +  KP LL
Sbjct: 132 IRIHQGKRNAAARAEALRMLELVRIPEARNVLDRFPHQLSGGMRQRVMIAMALSCKPQLL 191

Query: 177 IADEPTTALDAVIQRDVMELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEK 236
           IADEPTTALD  IQ  +++L+ EL +     +L I+HD+ +VA    R++VM +G  VE 
Sbjct: 192 IADEPTTALDVTIQAQILQLIRELQKEMRMGVLFITHDMGVVAEIADRVLVMYRGDKVEA 251

Query: 237 GRTEDLLKAPQHPYTKKLLSSLPFRGRPRQIDL------------------------TSV 272
           G ++ +  +PQHPYT+ LLS++P  G  +  DL                        T+V
Sbjct: 252 GSSDSVFSSPQHPYTRALLSAVPKLGAMQGTDLPAKFELLRTEGSPDTVPCADTQPQTTV 311

Query: 273 -----PMISARDIIVDYAGRKSLFRKNKPK-RALHGVSIDIHEGEVVALVGGSGSGKTTL 326
                P++  RD++  +  R  +F + K +  A+  +S D++ GE +ALVG SG GK+T 
Sbjct: 312 REEAGPILRVRDLVTRFDVRSGIFGRVKRRVHAVEKISFDLYPGETLALVGESGCGKSTT 371

Query: 327 GRTIAGLVTESEGRIQFQGRP----RTENWTDYRLNCQMVFQDPYSSLDPRMTIEALVEE 382
           GR++  LV    G I+F GR      T      R N Q +FQDP++SLDPR+T+   + E
Sbjct: 372 GRSLLRLVESQSGAIEFGGRNIRELPTRELQALRRNIQFIFQDPFASLDPRVTVGFSIME 431

Query: 383 ALRPVPGLDGKAKRKRTLETLEEVGLGVDYAGRYPHELSGGQRQRVAIARAIARRPRFLI 442
            L       G   ++R    L++VGL  + A RYPHE SGGQRQR+AIARA+A  P+ ++
Sbjct: 432 PLLIHGIAKGAEAQQRVDWLLQKVGLPPEVAQRYPHEFSGGQRQRIAIARALALNPKVVV 491

Query: 443 ADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEG 502
           ADE VSALDV+++AQ+++L  DLQ+  G + LFISHD+ VVE+++ RV VM  G+I+E G
Sbjct: 492 ADESVSALDVSIQAQIVNLMLDLQRELGVAFLFISHDMAVVERISHRVAVMYLGQIVEIG 551

Query: 503 DRDTIFDSPKEAYTRRLLSAIPALDQNEK 531
            R  +F++P+ AYTR+L++A+P  D + +
Sbjct: 552 PRRAVFEAPQHAYTRKLMAAVPVADPSRR 580



 Score =  182 bits (463), Expect = 3e-50
 Identities = 100/255 (39%), Positives = 154/255 (60%), Gaps = 12/255 (4%)

Query: 24  VKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTIKVADGSVSYKGRDVLKMKENE 83
           V+ +SFDL PGE   +VGESG GK+   R+L+ L    ++   G++ + GR++ ++   E
Sbjct: 345 VEKISFDLYPGETLALVGESGCGKSTTGRSLLRL----VESQSGAIEFGGRNIRELPTRE 400

Query: 84  LRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKASAQERRSLILDMLKRVGIRD 143
           L+ LR   I  +FQ+P  SL+P +T+G  + E L++H  A   E +  +  +L++VG+  
Sbjct: 401 LQALR-RNIQFIFQDPFASLDPRVTVGFSIMEPLLIHGIAKGAEAQQRVDWLLQKVGL-- 457

Query: 144 PEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPTTALDAVIQRDVMELMVELTRA 203
           P      YPHEFSGG RQRI +A  + L P +++ADE  +ALD  IQ  ++ LM++L R 
Sbjct: 458 PPEVAQRYPHEFSGGQRQRIAIARALALNPKVVVADESVSALDVSIQAQIVNLMLDLQRE 517

Query: 204 EGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTEDLLKAPQHPYTKKLLSSLPF--- 260
            G A L ISHD+ +V R + R+ VM  G IVE G    + +APQH YT+KL++++P    
Sbjct: 518 LGVAFLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFEAPQHAYTRKLMAAVPVADP 577

Query: 261 --RGRPRQIDLTSVP 273
             R +PR +    +P
Sbjct: 578 SRRHKPRALLEGEIP 592



 Score =  169 bits (429), Expect = 2e-46
 Identities = 103/259 (39%), Positives = 144/259 (55%), Gaps = 17/259 (6%)

Query: 299 ALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVTESEGRI---QFQGRPRTENWTDY 355
           A+  +S  +  GE +A+VG SGSGK+     +  LV    GRI   +   R R     D 
Sbjct: 32  AVKNLSFHVDHGETLAVVGESGSGKSVTSLALMRLVEHGGGRILGGRMAFRRRNGEVLDL 91

Query: 356 R------------LNCQMVFQDPYSSLDPRMTIEALVEEALRPVPGLDGKAKRKRTLETL 403
                         +  M+FQ+P +SL+P  T    + EA+R   G    A R   L  L
Sbjct: 92  AQARDTTMRGIRGADIAMIFQEPMTSLNPVFTAGDQIAEAIRIHQGKRNAAARAEALRML 151

Query: 404 EEVGL--GVDYAGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDL 461
           E V +    +   R+PH+LSGG RQRV IA A++ +P+ LIADEP +ALDVT++AQ+L L
Sbjct: 152 ELVRIPEARNVLDRFPHQLSGGMRQRVMIAMALSCKPQLLIADEPTTALDVTIQAQILQL 211

Query: 462 FSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLS 521
             +LQK      LFI+HD+GVV ++ADRV+VM  G  +E G  D++F SP+  YTR LLS
Sbjct: 212 IRELQKEMRMGVLFITHDMGVVAEIADRVLVMYRGDKVEAGSSDSVFSSPQHPYTRALLS 271

Query: 522 AIPALDQNEKGGVTLKWRL 540
           A+P L   +   +  K+ L
Sbjct: 272 AVPKLGAMQGTDLPAKFEL 290