Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 625 a.a., peptide transport system ATP-binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  410 bits (1054), Expect = e-119
 Identities = 229/537 (42%), Positives = 322/537 (59%), Gaps = 33/537 (6%)

Query: 23  VVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTIKVADGSVSYKGRDVLKMKEN 82
           VV+ VSFD+   E   +VGESGSGK++   +++ L  P     +GSV   G+++L + + 
Sbjct: 46  VVQGVSFDIGARETVAVVGESGSGKSVTALSIMRLNSPRGTKIEGSVKLGGKELLSLSDA 105

Query: 83  ELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKASAQERRSLILDMLKRVGIR 142
           E+R +RG +I ++FQEPMTSLNP +TIG Q+ E LILH   S  +  +  + +L++V I 
Sbjct: 106 EMRQIRGNDIAMIFQEPMTSLNPVLTIGFQIAESLILHRGLSRAQAENETIRLLEKVRIP 165

Query: 143 DPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPTTALDAVIQRDVMELMVELTR 202
             +     YPH FSGGMRQR+M+A  +  KP LLIADEPTTALD  IQ  ++EL+ EL +
Sbjct: 166 AAKSRFHEYPHRFSGGMRQRVMIAMALACKPKLLIADEPTTALDVTIQAQILELIKELQQ 225

Query: 203 AEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTEDLLKAPQHPYTKKLLSSLPFRG 262
            +G ++L I+HD+ +VA    R VVM KG  VE   T+D+   P HPYT+ LLS++P  G
Sbjct: 226 EDGMSVLFITHDMGVVAEIADRTVVMYKGQAVETASTDDIFNRPNHPYTRSLLSAVPKLG 285

Query: 263 R--------------------------PRQIDLTSVPMISARDIIVDYAGRKSLFRKNKP 296
                                      P  + ++  P++    +   +  +  LF   K 
Sbjct: 286 SMAGRSRPMRFPVVDRSTGEADVPVEVPDTVKVSERPVLEVAGLTKRFEVKSGLFSTVKG 345

Query: 297 -KRALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVTESEGRIQFQG----RPRTEN 351
              A+  VS  I  GE +ALVG SG GK+T GR++  LV  S G +   G    +     
Sbjct: 346 CVHAVENVSFSIKAGETLALVGESGCGKSTTGRSVMRLVEPSGGLVLLDGVDVLKLSQNE 405

Query: 352 WTDYRLNCQMVFQDPYSSLDPRMTIEALVEEALRPVPGLDGKAK-RKRTLETLEEVGLGV 410
               R + QM+FQDPY+SL+PRM I   + E L  + G  G+++   +  E L++VGL  
Sbjct: 406 LRHQRNHMQMIFQDPYASLNPRMNIGTAIAEPLL-INGKGGQSEVADKVAELLQKVGLSP 464

Query: 411 DYAGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYG 470
           D A R+PHE SGGQRQR+ IARA+A  P+ ++ADE VSALDV+V++QV++L  DLQ R G
Sbjct: 465 DMAKRFPHEFSGGQRQRICIARALALEPKLIVADEAVSALDVSVKSQVVNLMLDLQARMG 524

Query: 471 FSCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLSAIPALD 527
            + LFISHD+ VVE+V+ RV VM  G I+E G R+ IF +P+  YTRRLLSA+P  D
Sbjct: 525 LAYLFISHDMAVVERVSHRVAVMYLGEIVEAGSREAIFQNPQHPYTRRLLSAVPIAD 581



 Score =  189 bits (481), Expect = 2e-52
 Identities = 103/249 (41%), Positives = 155/249 (62%), Gaps = 7/249 (2%)

Query: 24  VKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTIKVADGSVSYKGRDVLKMKENE 83
           V++VSF +  GE   +VGESG GK+   R+++ L+ P+     G V   G DVLK+ +NE
Sbjct: 350 VENVSFSIKAGETLALVGESGCGKSTTGRSVMRLVEPS----GGLVLLDGVDVLKLSQNE 405

Query: 84  LRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKASAQERRSLILDMLKRVGIRD 143
           LRH R   + ++FQ+P  SLNP M IG  + E L+++ K    E    + ++L++VG+  
Sbjct: 406 LRHQRN-HMQMIFQDPYASLNPRMNIGTAIAEPLLINGKGGQSEVADKVAELLQKVGL-S 463

Query: 144 PEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPTTALDAVIQRDVMELMVELTRA 203
           P+ A   +PHEFSGG RQRI +A  + L+P L++ADE  +ALD  ++  V+ LM++L   
Sbjct: 464 PDMA-KRFPHEFSGGQRQRICIARALALEPKLIVADEAVSALDVSVKSQVVNLMLDLQAR 522

Query: 204 EGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTEDLLKAPQHPYTKKLLSSLPFRGR 263
            G A L ISHD+ +V R + R+ VM  G IVE G  E + + PQHPYT++LLS++P    
Sbjct: 523 MGLAYLFISHDMAVVERVSHRVAVMYLGEIVEAGSREAIFQNPQHPYTRRLLSAVPIADP 582

Query: 264 PRQIDLTSV 272
            R++   +V
Sbjct: 583 ARRLQKRTV 591