Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 556 a.a., ABC transporter for D-Raffinose, ATPase component (from data) from Sinorhizobium meliloti 1021

 Score =  401 bits (1030), Expect = e-116
 Identities = 224/520 (43%), Positives = 319/520 (61%), Gaps = 11/520 (2%)

Query: 12  LSLEVARTGQQVVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTIKVA-DGSVS 70
           +S +V     Q VK VSF L  GE   IVGESGSGK++  R ++ LL     +A    + 
Sbjct: 33  VSFKVENGTVQAVKDVSFQLYRGETVAIVGESGSGKSVTARTVMGLLSKRATIAPQARIE 92

Query: 71  YKGRDVLKMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKASAQERRS 130
           Y GRDVLK  + E R LRG  I ++FQEPM+SLNP  TIG Q+ E +  H + S +    
Sbjct: 93  YDGRDVLKFSKRERRALRGDRISMIFQEPMSSLNPVYTIGSQIIEAIRAHRRVSRRAAAE 152

Query: 131 LILDMLKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPTTALDAVIQ 190
             L++L+ V I DPE  L+ YPH+ SGG RQR+M+A  +   P +LIADEPTTALD  +Q
Sbjct: 153 RALELLRHVQIPDPEARLNQYPHQLSGGQRQRVMIAMALANDPDVLIADEPTTALDVTVQ 212

Query: 191 RDVMELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTEDLLKAPQHPY 250
             ++ L+ +L +  G A++LI+HDL +V +++  + VM+ G + E   TE L   PQH Y
Sbjct: 213 AQILNLIRKLQQELGMAVILITHDLTVVRQFSDYVYVMQLGEVKEHNTTEALFADPQHAY 272

Query: 251 TKKLLSSLPFRGRPRQIDLTSVPMISARDIIVDYAGRKSLFRKNKPKR--ALHGVSIDIH 308
           T++LLSS P  G    +   +  ++  R++ V +  +K  F + + K   A+ G+S+++ 
Sbjct: 273 TRRLLSSEP-SGSANPLPDDAPILLDGRNVRVSFTLKKGGFFRPEFKELVAVDGLSLNLR 331

Query: 309 EGEVVALVGGSGSGKTTLGRTIAGLVTESEGRIQFQGRP----RTENWTDYRLNCQMVFQ 364
             E + LVG SGSGKTT G+ +  L+    G I F+G P      +     R   Q+VFQ
Sbjct: 332 RHETLGLVGESGSGKTTFGQALIRLLNTDGGEIYFEGEPIHDKDRKGMRPLRSKIQIVFQ 391

Query: 365 DPYSSLDPRMTIEALVEEALRPVPGL--DGKAKRKRTLETLEEVGLGVDYAGRYPHELSG 422
           DP+SSL+PRM++  ++EE L  V G+  + K + KR  + L   G+  +   R+PHE SG
Sbjct: 392 DPFSSLNPRMSVGQIIEEGL-IVNGMGENRKDRLKRVEDALVSAGMPSNILSRFPHEFSG 450

Query: 423 GQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGV 482
           GQRQR+AIARA+A  P F++ DEP SALD++V+AQ+++L   LQ   G S L ISHDL V
Sbjct: 451 GQRQRIAIARAVALEPEFILLDEPTSALDLSVQAQIIELLRRLQDERGLSYLVISHDLKV 510

Query: 483 VEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLSA 522
           V  +  RVVVMQDG+I+EEG    + ++PK AYT RL+ A
Sbjct: 511 VRALCHRVVVMQDGKIVEEGPVSEVLNNPKTAYTERLVKA 550



 Score =  180 bits (456), Expect = 1e-49
 Identities = 111/269 (41%), Positives = 157/269 (58%), Gaps = 18/269 (6%)

Query: 273 PMISARDIIVDYAGRKSLFRKNKPKRALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAG 332
           P+I AR + V +        +N   +A+  VS  ++ GE VA+VG SGSGK+   RT+ G
Sbjct: 24  PVIDARKVAVSFKV------ENGTVQAVKDVSFQLYRGETVAIVGESGSGKSVTARTVMG 77

Query: 333 LVTES-----EGRIQFQGRP-----RTENWTDYRLNCQMVFQDPYSSLDPRMTIEALVEE 382
           L+++      + RI++ GR      + E          M+FQ+P SSL+P  TI + + E
Sbjct: 78  LLSKRATIAPQARIEYDGRDVLKFSKRERRALRGDRISMIFQEPMSSLNPVYTIGSQIIE 137

Query: 383 ALRPVPGLDGKAKRKRTLETLEEVGLGVDYA--GRYPHELSGGQRQRVAIARAIARRPRF 440
           A+R    +  +A  +R LE L  V +    A   +YPH+LSGGQRQRV IA A+A  P  
Sbjct: 138 AIRAHRRVSRRAAAERALELLRHVQIPDPEARLNQYPHQLSGGQRQRVMIAMALANDPDV 197

Query: 441 LIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIE 500
           LIADEP +ALDVTV+AQ+L+L   LQ+  G + + I+HDL VV Q +D V VMQ G + E
Sbjct: 198 LIADEPTTALDVTVQAQILNLIRKLQQELGMAVILITHDLTVVRQFSDYVYVMQLGEVKE 257

Query: 501 EGDRDTIFDSPKEAYTRRLLSAIPALDQN 529
               + +F  P+ AYTRRLLS+ P+   N
Sbjct: 258 HNTTEALFADPQHAYTRRLLSSEPSGSAN 286