Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 630 a.a., mureinpeptideoligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  375 bits (962), Expect = e-108
 Identities = 230/570 (40%), Positives = 324/570 (56%), Gaps = 44/570 (7%)

Query: 6   LLTVCGLSLEVARTGQQV--VKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTIK 63
           LL V GL +  +  G +V  V+  +F + PG +  +VGESGSGK+  ++A++ +LP    
Sbjct: 7   LLRVEGLRITFSVLGGEVEAVRGANFRILPGRVTALVGESGSGKSAISQAIMGILPSVAS 66

Query: 64  VA------DGSVSYKGRDVLKMKEN--ELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEE 115
           V       D        D+L +  +  +++ +RGA I  +FQEPMTSL+P  TIG Q+ E
Sbjct: 67  VGGRVLFNDPEAEANPVDLLSLDRDGRDIQEIRGARISKIFQEPMTSLSPLHTIGNQISE 126

Query: 116 GLILHTKASAQERRSLILDMLKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPAL 175
            L +HT A    RR    ++L  VG  DP+ A   YP E SGGMRQR M+A  ++ +PAL
Sbjct: 127 VLKIHTDADKAGRRERTEELLGYVGFSDPKRAYDMYPFELSGGMRQRAMIAMALICRPAL 186

Query: 176 LIADEPTTALDAVIQRDVMELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVE 235
           LIADEPTTALD  +Q  +++L+ EL      A+LLI+HDL +VA     +VV+  G IVE
Sbjct: 187 LIADEPTTALDVTVQAQILQLLRELQSKLNMAMLLITHDLGVVANMADEVVVIYHGEIVE 246

Query: 236 KGRTEDLLKAPQHPYTKKLLSSLP-FRGRP--RQIDLTSVP------------------- 273
            G  + + + P+HPY K L++++P F  +P  R   L  VP                   
Sbjct: 247 AGPVDAIFRNPRHPYLKGLMAAVPHFDMKPGERLKALREVPVKAGAIVGDREVKKAAGPN 306

Query: 274 -MISARDIIVDYAGRKSLFRKNKP---KRALHGVSIDIHEGEVVALVGGSGSGKTTLGRT 329
            ++S R++   ++ R S +  +      RA+  VS DI  GE + LVG SG GKTT+ + 
Sbjct: 307 VLVSVRNLSKTFSTRSSGWFGSGTAYRHRAVDNVSFDIRRGECLGLVGESGCGKTTVSKI 366

Query: 330 IAGLVTESEGRIQF-QGRPRTE-------NWTDYRLNCQMVFQDPYSSLDPRMTIEALVE 381
           +   VT  +G I F  G    +            R   QMVFQDP SSL PRMT++ ++ 
Sbjct: 367 LMRAVTPDKGTITFDDGEGALDVLKLDGGELKALRAKIQMVFQDPVSSLSPRMTVKNILS 426

Query: 382 EALRPVPGLDGKAKRKRTLETLEEVGLGVDYAGRYPHELSGGQRQRVAIARAIARRPRFL 441
           E L        K++ +     L+ VGL   +  RYPH  SGGQRQR+ IARA+A  P+ L
Sbjct: 427 EPLEIHGRGTPKSREEHVRSLLQAVGLDQRFINRYPHSFSGGQRQRIGIARALALVPQLL 486

Query: 442 IADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEE 501
           I DEPVSALDV+V+AQ+L+L  DLQK  G + LFISH+L VV+ +ADR+ VM  GRI+E 
Sbjct: 487 ICDEPVSALDVSVQAQILNLLKDLQKELGLTMLFISHNLAVVDYMADRIAVMCAGRIVEL 546

Query: 502 GDRDTIFDSPKEAYTRRLLSAIPALDQNEK 531
             R+ +  +P   YTR LL+A+P  D + K
Sbjct: 547 APREVLMRNPVHPYTRSLLAAVPYPDLDRK 576



 Score =  179 bits (454), Expect = 3e-49
 Identities = 104/261 (39%), Positives = 155/261 (59%), Gaps = 9/261 (3%)

Query: 22  QVVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPP---TIKVADGSVSYKGRDVLK 78
           + V +VSFD+  GE  G+VGESG GKT  ++ L+  + P   TI   DG  +    DVLK
Sbjct: 335 RAVDNVSFDIRRGECLGLVGESGCGKTTVSKILMRAVTPDKGTITFDDGEGAL---DVLK 391

Query: 79  MKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKASAQERRSLILDMLKR 138
           +   EL+ LR A+I +VFQ+P++SL+P MT+   L E L +H + + + R   +  +L+ 
Sbjct: 392 LDGGELKALR-AKIQMVFQDPVSSLSPRMTVKNILSEPLEIHGRGTPKSREEHVRSLLQA 450

Query: 139 VGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPTTALDAVIQRDVMELMV 198
           VG+   +  ++ YPH FSGG RQRI +A  + L P LLI DEP +ALD  +Q  ++ L+ 
Sbjct: 451 VGL--DQRFINRYPHSFSGGQRQRIGIARALALVPQLLICDEPVSALDVSVQAQILNLLK 508

Query: 199 ELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTEDLLKAPQHPYTKKLLSSL 258
           +L +  G  +L ISH+L +V     RI VM  G IVE    E L++ P HPYT+ LL+++
Sbjct: 509 DLQKELGLTMLFISHNLAVVDYMADRIAVMCAGRIVELAPREVLMRNPVHPYTRSLLAAV 568

Query: 259 PFRGRPRQIDLTSVPMISARD 279
           P+    R++D  S+      D
Sbjct: 569 PYPDLDRKLDFDSLQASGGSD 589