Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 524 a.a., putative ABC transporter ATP-binding protein YejF from Pseudomonas sp. DMC3

 Score =  413 bits (1061), Expect = e-120
 Identities = 222/515 (43%), Positives = 323/515 (62%), Gaps = 9/515 (1%)

Query: 13  SLEVARTGQQVVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTIKVADGSVSYK 72
           +L VA  GQ VV+ +  D+ PGE   +VGESGSGK++   +++ LLP +     GS+ Y+
Sbjct: 10  NLNVAFHGQTVVRDLCLDIRPGECLALVGESGSGKSVTAHSILQLLPESEAQTRGSIRYR 69

Query: 73  GRDVLKMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKASAQERRSLI 132
           G+++L      LR LRG  I ++FQEPMTSLNP  TI +Q+ E L+LH     ++ +  I
Sbjct: 70  GQELLGADPKVLRELRGNRIAMIFQEPMTSLNPLHTIEKQIGETLLLHRGLGGKQAQQRI 129

Query: 133 LDMLKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPTTALDAVIQRD 192
           L++L  VGI+ P+  L +YPH+ SGG RQR+M+A  +  +P LLIADEPTTALD  +QR 
Sbjct: 130 LELLGLVGIQKPKERLKAYPHQLSGGQRQRVMIAMALACEPELLIADEPTTALDVTVQRK 189

Query: 193 VMELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTEDLLKAPQHPYTK 252
           ++ L+  L +  G ++LLISHDL +V     R+ VM+ G IVE+   E L   P+HPY+ 
Sbjct: 190 ILLLLKSLQQRLGMSLLLISHDLNLVRSIAQRVCVMKAGQIVEQAPCETLFTEPKHPYSC 249

Query: 253 KLLSSLP-FRGRPRQIDLTSVPMISARDIIVDYAGRKSLFRKNKPKRALHGVSIDIHEGE 311
            LL++ P     PR        ++   D+ VD+     LFR+ +  RA+ G+S++I  G+
Sbjct: 250 VLLNAEPEGEALPRD---ERENVLEVADLRVDFQVGGGLFRRKQYLRAVDGISLNIQRGK 306

Query: 312 VVALVGGSGSGKTTLGRTIAGLVTESEGRIQFQGRP----RTENWTDYRLNCQMVFQDPY 367
            + +VG SGSGK+TLG+ I  L+ +SEG I+FQG        +    +R   Q+VFQDP+
Sbjct: 307 TLGIVGESGSGKSTLGQAILRLL-DSEGSIRFQGEALDGLNQKQLRPWRRQMQVVFQDPF 365

Query: 368 SSLDPRMTIEALVEEALRPVPGLDGKAKRKRTLETLEEVGLGVDYAGRYPHELSGGQRQR 427
            SL PRM++  ++ E L            K+ +  L EVGL  +   RYPHE SGGQRQR
Sbjct: 366 GSLSPRMSVAQIISEGLEVHCESTANECDKQVIRVLREVGLDPESRHRYPHEFSGGQRQR 425

Query: 428 VAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVA 487
           +AIARA+  +P  ++ DEP SALD TV+ QV+ L  DLQ++YG + LFISHDL VV  +A
Sbjct: 426 IAIARALVLKPALILLDEPTSALDRTVQKQVVALLRDLQEKYGLTYLFISHDLAVVRALA 485

Query: 488 DRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLSA 522
             ++V++DG+++E G    +FD+P+  YT+ LL+A
Sbjct: 486 HDMIVIKDGQVVERGASHDVFDNPQHPYTKELLAA 520



 Score =  171 bits (433), Expect = 6e-47
 Identities = 112/256 (43%), Positives = 153/256 (59%), Gaps = 20/256 (7%)

Query: 299 ALHGVSI------DIHEGEVVALVGGSGSGKTTLGRTIAGLVTESE----GRIQFQGRPR 348
           A HG ++      DI  GE +ALVG SGSGK+    +I  L+ ESE    G I+++G+  
Sbjct: 14  AFHGQTVVRDLCLDIRPGECLALVGESGSGKSVTAHSILQLLPESEAQTRGSIRYRGQEL 73

Query: 349 T----ENWTDYRLN-CQMVFQDPYSSLDPRMTIEALVEEALRPVPGLDGKAKRKRTLETL 403
                +   + R N   M+FQ+P +SL+P  TIE  + E L    GL GK  ++R LE L
Sbjct: 74  LGADPKVLRELRGNRIAMIFQEPMTSLNPLHTIEKQIGETLLLHRGLGGKQAQQRILELL 133

Query: 404 EEVGLGV--DYAGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDL 461
             VG+    +    YPH+LSGGQRQRV IA A+A  P  LIADEP +ALDVTV+ ++L L
Sbjct: 134 GLVGIQKPKERLKAYPHQLSGGQRQRVMIAMALACEPELLIADEPTTALDVTVQRKILLL 193

Query: 462 FSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLS 521
              LQ+R G S L ISHDL +V  +A RV VM+ G+I+E+   +T+F  PK  Y+  LL+
Sbjct: 194 LKSLQQRLGMSLLLISHDLNLVRSIAQRVCVMKAGQIVEQAPCETLFTEPKHPYSCVLLN 253

Query: 522 AIP---ALDQNEKGGV 534
           A P   AL ++E+  V
Sbjct: 254 AEPEGEALPRDERENV 269