Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 544 a.a., putative ABC transporter ATP-binding protein YejF from Pseudomonas sp. DMC3

 Score =  402 bits (1034), Expect = e-116
 Identities = 223/515 (43%), Positives = 323/515 (62%), Gaps = 10/515 (1%)

Query: 14  LEVARTGQQVVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTIKVADGSVSYKG 73
           L VA  GQ+VV  V+ D+  GE   +VGESGSGK++   +++ LLP     + G++ Y G
Sbjct: 11  LRVAFAGQEVVHGVNLDIRRGECLALVGESGSGKSVTAHSILRLLPGQSVSSSGAIRYNG 70

Query: 74  RDVLKMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKASAQERRSLIL 133
            D+L   E ++R LRG  I ++FQEPMTSLNP  T+ +Q+ E L +H     +  R+  L
Sbjct: 71  VDLLHASEQQMRGLRGNRIAMIFQEPMTSLNPLHTVEKQVSEVLEIHKGLKGRAARARTL 130

Query: 134 DMLKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPTTALDAVIQRDV 193
           ++L+ VGIR P   L +YPH+ SGG RQR+M+A  +  +P LLIADEPTTALD  +Q+ +
Sbjct: 131 ELLELVGIRQPLQRLKAYPHQLSGGQRQRVMIAMALANEPELLIADEPTTALDVTVQQKI 190

Query: 194 MELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTEDLLKAPQHPYTKK 253
           +EL++EL +  G ++LLISHDL +V R   R+ VM +G IVE+   E L + PQHPY++ 
Sbjct: 191 LELLIELQQRLGMSLLLISHDLNLVRRIAQRVCVMRQGEIVEQADCETLFQVPQHPYSRL 250

Query: 254 LLSSLPFRGRPRQIDLTSVPMISARDIIVDYAGRKSLF-RKNKPKRALHGVSIDIHEGEV 312
           L+ + P  G P   +     ++   D+ V +   K LF R+    +A+ GVS  +  G+ 
Sbjct: 251 LIEAEP-SGAPVPSEYEH-NLLEVDDLKVWFPLPKKLFSRQQDYIKAVDGVSFTLQRGKT 308

Query: 313 VALVGGSGSGKTTLGRTIAGLVTESEGRIQFQGRP----RTENWTDYRLNCQMVFQDPYS 368
           + +VG SGSGK+TLG+ I  LV ESEG I+F  +             R   Q+VFQDP+ 
Sbjct: 309 LGIVGESGSGKSTLGQAILRLV-ESEGNIRFGNKQLSLLNQRLMRPLRRQIQVVFQDPFG 367

Query: 369 SLDPRMTIEALVEEALRPVPGLDGKAKRK-RTLETLEEVGLGVDYAGRYPHELSGGQRQR 427
           SL PRM+++ ++ E L    G+  +A+R+   +  LEEVGL      RYPHE SGGQRQR
Sbjct: 368 SLSPRMSVQQIIAEGLL-THGIGSEAEREAAVIRVLEEVGLDPQSRHRYPHEFSGGQRQR 426

Query: 428 VAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVA 487
           ++IARA+   P  ++ DEP SALD TV+ QV++L   LQ R+G + LFISHDL VV  +A
Sbjct: 427 ISIARALVLEPALILLDEPTSALDRTVQKQVVELLRQLQIRHGLTYLFISHDLAVVHALA 486

Query: 488 DRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLSA 522
             ++V++DG+++E+G    IF +P+  YT+ LL A
Sbjct: 487 HDLMVIKDGKVVEQGSSREIFAAPQHPYTQELLKA 521



 Score =  195 bits (495), Expect = 4e-54
 Identities = 115/263 (43%), Positives = 159/263 (60%), Gaps = 21/263 (7%)

Query: 274 MISARDIIVDYAGRKSLFRKNKPKRALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGL 333
           +I  RD+ V +AG++           +HGV++DI  GE +ALVG SGSGK+    +I  L
Sbjct: 5   LIEIRDLRVAFAGQE----------VVHGVNLDIRRGECLALVGESGSGKSVTAHSILRL 54

Query: 334 V----TESEGRIQFQG----RPRTENWTDYRLN-CQMVFQDPYSSLDPRMTIEALVEEAL 384
           +      S G I++ G        +     R N   M+FQ+P +SL+P  T+E  V E L
Sbjct: 55  LPGQSVSSSGAIRYNGVDLLHASEQQMRGLRGNRIAMIFQEPMTSLNPLHTVEKQVSEVL 114

Query: 385 RPVPGLDGKAKRKRTLETLEEVGLG--VDYAGRYPHELSGGQRQRVAIARAIARRPRFLI 442
               GL G+A R RTLE LE VG+   +     YPH+LSGGQRQRV IA A+A  P  LI
Sbjct: 115 EIHKGLKGRAARARTLELLELVGIRQPLQRLKAYPHQLSGGQRQRVMIAMALANEPELLI 174

Query: 443 ADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEG 502
           ADEP +ALDVTV+ ++L+L  +LQ+R G S L ISHDL +V ++A RV VM+ G I+E+ 
Sbjct: 175 ADEPTTALDVTVQQKILELLIELQQRLGMSLLLISHDLNLVRRIAQRVCVMRQGEIVEQA 234

Query: 503 DRDTIFDSPKEAYTRRLLSAIPA 525
           D +T+F  P+  Y+R L+ A P+
Sbjct: 235 DCETLFQVPQHPYSRLLIEAEPS 257